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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c1cz5A_

Fold library idPDB HeaderMoleculeTitle
c1cz5A_PDB header: hydrolaseChain: A: PDB Molecule: vcp-like atpase;PDBTitle: nmr structure of vat-n: the n-terminal domain of vat (vcp-2 like atpase of thermoplasma)


Added to library: Tue Mar 16 13:04:50 2010
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence MESNNGIILRVAEANSTDPGMSRVRLDESSRRLLDAEIGDVVEIEKVRKTVGRVYRARPEDENKGIVRID
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Known secondary structure (DSSP)






S

S

SS
TTS

TT
SSS
SSTTTTTS

 .........80.........90.........100.........110.........120.........130.........140
Sequence SVMRNNCGASIGDKVKVRKVRTEIAKKVTLAPIIRKDQRLKFGEGIEEYVQRALIRRPMLEQDNISVPGL
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Known secondary structure (DSSP) T

TT




B
S
S
TTTT



SSSS

TT


SS
 .........150.........160.........170.........180.....
Sequence TLAGQTGLLFKVVKTLPSKVPVEIGEETKIEIREEPASEVLEEGG
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Known secondary structure (DSSP)

SS



SSSSSS


TT

S

SSS
S




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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