Fold library entry viewer: c1ogyA_

Added to library: Tue Mar 16 12:56:38 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	I	R	W	S	K	A	P	C	R	F	C	G	T	G	C	G	V	M	V	G	T	R	D	G	Q	V	V	A	T	H	G	D	T	Q	A	E	V	N	R	G	L	N	C	V	K	G	Y	F	L	S	K	I	M	Y	G	E	D	R	L	T	T	P	L	L	R	M	K	D	G	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S		S	S										T	T									T	T		T	T	T	S	S								G	G	G	G	S	T	T		T	T				S				S		S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Y	H	K	E	G	E	F	A	P	V	S	W	D	E	A	F	D	V	M	A	A	Q	A	K	L	V	L	K	E	K	A	P	E	A	V	G	M	F	G	S	G	Q	W	T	I	W	E	G	Y	A	A	S	K	L	M	R	A	G	F	R	S	N	N	L	D	P	N	A	R	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T																										T		G	G	G							T	T	S														T	T	S								T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	C	M	A	S	A	A	T	A	F	M	R	T	F	G	M	D	E	P	M	G	C	Y	D	D	F	E	A	A	D	A	F	V	L	W	G	S	N	M	A	E	M	H	P	I	L	W	S	R	L	T	D	R	R	L	S	H	E	H	V	R	V	A	V	L	S	T	F	T	H	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T												S	S		S		S	S		T	T						S						S							S														S	T	T								S	S	B		G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	S	S	D	L	S	D	T	P	I	I	F	R	P	G	T	D	R	A	I	L	N	Y	I	A	H	H	I	I	S	T	G	R	V	N	R	D	F	V	D	R	H	T	N	F	A	L	G	A	T	D	I	G	Y	G	L	R	P	E	H	Q	L	Q	L	A	A	K	G	A	A	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G	S		S							T	T	T															T	T																		S	S			T	T			T	T	S					S		T	T		S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	A	G	A	M	T	P	T	D	F	E	T	F	A	A	L	V	S	E	Y	T	L	E	K	A	A	E	I	S	G	V	E	P	A	L	L	E	E	L	A	E	L	Y	A	D	P	D	R	K	W	M	S	L	W	T	M	G	F	N	Q	H	V	R	G	V	W	A	N	H	M	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S				B												T	S																							T	T	S	T	T	S							S					S	S	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	Y	N	L	H	L	L	T	G	K	I	S	E	P	G	N	S	P	F	S	L	T	G	Q	P	F	A	C	G	T	A	R	E	V	G	T	F	A	H	R	L	P	A	D	M	V	V	T	N	P	E	H	R	A	H	A	E	E	I	W	K	L	P	A	G	L	L	P	D	W	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T			S	B	T	T	B								S	T	T	T	T	T	T					T		S	T	T			T	T	T			S	S												T	T			T	T		S			S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	G	A	H	A	V	E	Q	D	R	K	L	H	D	G	E	I	N	F	Y	W	V	Q	V	N	N	N	M	Q	A	A	P	N	I	D	Q	E	T	Y	P	G	Y	R	N	P	E	N	F	I	V	V	S	D	A	Y	P	T	V	T	G	R	A	A	D	L	V	L	P	A	A	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	S								S							S	T	T												T	T								S	S							T	S	S					B
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	W	V	E	K	E	G	A	Y	G	N	A	E	R	R	T	H	F	W	H	Q	L	V	E	A	P	G	E	A	R	S	D	L	W	Q	L	M	E	F	S	K	R	F	T	T	D	E	V	W	P	E	E	I	L	S	A	A	P	A	Y	R	G	K	T	L	F	E	V	L	F	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G	S							T	T	S							B		S			S	T	T		B											T	T							S									S	S	S	S	S			T	T	T	T	T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	N	G	S	V	D	R	F	P	A	S	D	V	N	P	D	H	A	N	H	E	A	A	L	F	G	F	Y	P	Q	K	G	L	F	E	E	Y	A	A	F	G	R	G	H	G	H	D	L	A	P	F	D	T	Y	H	E	V	R	G	L	H	W	P	V	V	E	G	E	E	T	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S	S	S		S	B	S	S	S	S		S	S	S	B						S	S	S	B												T	T	S	S	S	S	S						T	T					S	S				S			B	T	T	B			S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	W	R	Y	R	E	G	F	D	P	Y	V	K	P	G	E	G	L	R	F	Y	G	K	P	D	G	R	A	V	I	L	G	V	P	Y	E	P	P	A	E	S	P	D	E	E	F	G	F	W	L	V	T	G	R	V	L	E	H	W	H	S	G	S	M	T	L	R	W	P	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S	B	B	T	T	B	T	T	S		S	S		S	B			T	T	S	S	S														S	S				S	S	S									B	T	T	B		T	T		T	T	G	G	G	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	Y	K	A	F	P	G	A	V	C	F	M	H	P	E	D	A	R	S	R	G	L	N	R	G	S	E	V	R	V	I	S	R	R	G	E	I	R	T	R	L	E	T	R	G	R	N	R	M	P	R	G	V	V	F	V	P	W	F	D	A	S	Q	L	I	N	K	V	T	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S		S													T	T			T	T								S	S									S	S	S	S	S	B			T	T									S	S	S		G	G	G	T	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.
Sequence	A	N	D	P	I	S	R	Q	T	D	F	K	K	C	A	V	K	I	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B		T	T	T			B			S

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PDB structure

FASTA sequence

Hidden Markov model

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