Email l.a.kelley@imperial.ac.uk Description P0AF78 Date Thu Jan 5 11:25:31 GMT 2012 Unique Job ID 308f77a309429405

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c1y4cA_ 75.4 9 PDB header:de novo protein Chain: A: PDB Molecule:maltose binding protein fused with designed PDBTitle: designed helical protein fusion mbp 2 c3ojaB_ 72.9 14 PDB header:protein binding Chain: B: PDB Molecule:anopheles plasmodium-responsive leucine-rich repeat protein PDBTitle: crystal structure of lrim1/apl1c complex 3 c2fxmB_ 70.7 12 PDB header:contractile protein Chain: B: PDB Molecule:myosin heavy chain, cardiac muscle beta isoform; PDBTitle: structure of the human beta-myosin s2 fragment 4 c3u59C_ 66.9 12 PDB header:contractile protein Chain: C: PDB Molecule:tropomyosin beta chain; PDBTitle: n-terminal 98-aa fragment of smooth muscle tropomyosin beta 5 c2efrB_ 66.3 11 PDB header:contractile protein Chain: B: PDB Molecule:general control protein gcn4 and tropomyosin 1 alpha chain; PDBTitle: crystal structure of the c-terminal tropomyosin fragment with n- and2 c-terminal extensions of the leucine zipper at 1.8 angstroms3 resolution 6 c2d3eD_ 53.6 16 PDB header:contractile protein Chain: D: PDB Molecule:general control protein gcn4 and tropomyosin 1 PDBTitle: crystal structure of the c-terminal fragment of rabbit2 skeletal alpha-tropomyosin 7 c2y3aB_ 40.2 13 PDB header:transferase Chain: B: PDB Molecule:phosphatidylinositol 3-kinase regulatory subunit beta; PDBTitle: crystal structure of p110beta in complex with icsh2 of p85beta and2 the drug gdc-0941 8 c1deqF_ 37.3 11 PDB header: PDB COMPND: 9 c4a55B_ 35.6 13 PDB header:transferase Chain: B: PDB Molecule:phosphatidylinositol 3-kinase regulatory subunit alpha; PDBTitle: crystal structure of p110alpha in complex with ish2 of p85alpha and2 the inhibitor pik-108 10 c3cvfA_ 34.4 15 PDB header:signaling protein Chain: A: PDB Molecule:homer protein homolog 3; PDBTitle: crystal structure of the carboxy terminus of homer3 11 c2b9cA_ 30.8 12 PDB header:contractile protein Chain: A: PDB Molecule:striated-muscle alpha tropomyosin; PDBTitle: structure of tropomyosin's mid-region: bending and binding2 sites for actin 12 c3ghgK_ 27.3 8 PDB header:blood clotting Chain: K: PDB Molecule:fibrinogen beta chain; PDBTitle: crystal structure of human fibrinogen 13 c3ol1A_ 25.4 12 PDB header:structural protein Chain: A: PDB Molecule:vimentin; PDBTitle: crystal structure of vimentin (fragment 144-251) from homo sapiens,2 northeast structural genomics consortium target hr4796b 14 c1ei3E_ 25.1 10 PDB header: PDB COMPND: 15 c1l8dB_ 23.6 11 PDB header:replication Chain: B: PDB Molecule:dna double-strand break repair rad50 atpase; PDBTitle: rad50 coiled-coil zn hook 16 c3hizB_ 22.8 13 PDB header:transferase/oncoprotein Chain: B: PDB Molecule:phosphatidylinositol 3-kinase regulatory subunit PDBTitle: crystal structure of p110alpha h1047r mutant in complex with2 nish2 of p85alpha 17 c3ipkA_ 20.3 11 PDB header:cell adhesion Chain: A: PDB Molecule:agi/ii; PDBTitle: crystal structure of a3vp1 of agi/ii of streptococcus mutans 18 c2rd0B_ 19.4 9 PDB header:transferase/oncoprotein Chain: B: PDB Molecule:phosphatidylinositol 3-kinase regulatory subunit alpha; PDBTitle: structure of a human p110alpha/p85alpha complex 19 c3cveC_ 19.3 15 PDB header:signaling protein Chain: C: PDB Molecule:homer protein homolog 1; PDBTitle: crystal structure of the carboxy terminus of homer1 20 c3o0zD_ 16.8 11 PDB header:transferase Chain: D: PDB Molecule:rho-associated protein kinase 1; PDBTitle: crystal structure of a coiled-coil domain from human rock i 21 c2gl2B_ not modelled 16.2 18 PDB header:cell adhesion Chain: B: PDB Molecule:adhesion a; PDBTitle: crystal structure of the tetra muntant (t66g,r67g,f68g,2 y69g) of bacterial adhesin fada 22 c2v71A_ not modelled 16.1 13 PDB header:nuclear protein Chain: A: PDB Molecule:nuclear distribution protein nude-like 1; PDBTitle: coiled-coil region of nudel 23 c3dtpA_ not modelled 15.8 13 PDB header:contractile protein Chain: A: PDB Molecule:myosin 2 heavy chain chimera of smooth and PDBTitle: tarantula heavy meromyosin obtained by flexible docking to2 tarantula muscle thick filament cryo-em 3d-map 24 c3na7A_ not modelled 15.5 8 PDB header:gene regulation, chaperone Chain: A: PDB Molecule:hp0958; PDBTitle: 2.2 angstrom structure of the hp0958 protein from helicobacter pylori2 ccug 17874 25 c3ojaA_ not modelled 14.6 9 PDB header:protein binding Chain: A: PDB Molecule:leucine-rich immune molecule 1; PDBTitle: crystal structure of lrim1/apl1c complex 26 c3a5tB_ not modelled 14.5 15 PDB header:transcription regulator/dna Chain: B: PDB Molecule:transcription factor mafg; PDBTitle: crystal structure of mafg-dna complex 27 c3cwgA_ not modelled 13.6 11 PDB header:transcription Chain: A: PDB Molecule:signal transducer and activator of transcription PDBTitle: unphosphorylated mouse stat3 core fragment 28 c1deqO_ not modelled 13.0 8 PDB header: PDB COMPND: 29 c3u1aC_ not modelled 11.8 19 PDB header:contractile protein Chain: C: PDB Molecule:smooth muscle tropomyosin alpha; PDBTitle: n-terminal 81-aa fragment of smooth muscle tropomyosin alpha 30 c3ajwA_ not modelled 11.5 15 PDB header:protein transport Chain: A: PDB Molecule:flagellar flij protein; PDBTitle: structure of flij, a soluble component of flagellar type iii export2 apparatus 31 c1c1gA_ not modelled 11.5 16 PDB header:contractile protein Chain: A: PDB Molecule:tropomyosin; PDBTitle: crystal structure of tropomyosin at 7 angstroms resolution2 in the spermine-induced crystal form 32 d2obpa1 not modelled 11.4 18 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:ReutB4095-like 33 c1ei3C_ not modelled 11.0 21 PDB header: PDB COMPND: 34 c2jziB_ not modelled 11.0 18 PDB header:metal binding protein Chain: B: PDB Molecule:serine/threonine-protein phosphatase 2b PDBTitle: structure of calmodulin complexed with the calmodulin2 binding domain of calcineurin 35 c2v66C_ not modelled 10.8 13 PDB header:structural protein Chain: C: PDB Molecule:nuclear distribution protein nude-like 1; PDBTitle: crystal structure of the coiled-coil domain of ndel1 (a.a.2 58 to 169)c 36 c1jchC_ not modelled 10.6 10 PDB header:ribosome inhibitor, hydrolase Chain: C: PDB Molecule:colicin e3; PDBTitle: crystal structure of colicin e3 in complex with its immunity protein 37 c1ic2B_ not modelled 10.5 18 PDB header:contractile protein Chain: B: PDB Molecule:tropomyosin alpha chain, skeletal muscle; PDBTitle: deciphering the design of the tropomyosin molecule 38 c1g8xB_ not modelled 10.4 13 PDB header:structural protein Chain: B: PDB Molecule:myosin ii heavy chain fused to alpha-actinin 3; PDBTitle: structure of a genetically engineered molecular motor 39 c3m9bK_ not modelled 10.2 24 PDB header:chaperone Chain: K: PDB Molecule:proteasome-associated atpase; PDBTitle: crystal structure of the amino terminal coiled coil domain and the2 inter domain of the mycobacterium tuberculosis proteasomal atpase mpa 40 c2wt7B_ not modelled 10.2 14 PDB header:transcription Chain: B: PDB Molecule:transcription factor mafb; PDBTitle: crystal structure of the bzip heterodimeric complex2 mafb:cfos bound to dna 41 d1vmaa1 not modelled 9.9 21 Fold:Four-helical up-and-down bundle Superfamily:Domain of the SRP/SRP receptor G-proteins Family:Domain of the SRP/SRP receptor G-proteins 42 c2z2qF_ not modelled 9.8 18 PDB header:virus/rna Chain: F: PDB Molecule:coat protein gamma; PDBTitle: crystal structure of flock house virus 43 c1deqD_ not modelled 9.5 13 PDB header: PDB COMPND: 44 d1kbha_ not modelled 9.5 24 Fold:Nuclear receptor coactivator interlocking domain Superfamily:Nuclear receptor coactivator interlocking domain Family:Nuclear receptor coactivator interlocking domain 45 c1fosE_ not modelled 9.3 12 PDB header:transcription/dna Chain: E: PDB Molecule:p55-c-fos proto-oncogene protein; PDBTitle: two human c-fos:c-jun:dna complexes 46 c3hnwB_ not modelled 9.3 10 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a basic coiled-coil protein of unknown function2 from eubacterium eligens atcc 27750 47 d1xvha1 not modelled 9.3 16 Fold:immunoglobulin/albumin-binding domain-like Superfamily:Bacterial immunoglobulin/albumin-binding domains Family:GA module, an albumin-binding domain 48 c1fosF_ not modelled 9.1 15 PDB header:transcription/dna Chain: F: PDB Molecule:c-jun proto-oncogene protein; PDBTitle: two human c-fos:c-jun:dna complexes 49 c2xdjF_ not modelled 9.0 7 PDB header:unknown function Chain: F: PDB Molecule:uncharacterized protein ybgf; PDBTitle: crystal structure of the n-terminal domain of e.coli ybgf 50 d1z0kb1 not modelled 8.8 31 Fold:Long alpha-hairpin Superfamily:Rabenosyn-5 Rab-binding domain-like Family:Rabenosyn-5 Rab-binding domain-like 51 c2oevA_ not modelled 8.8 13 PDB header:protein transport Chain: A: PDB Molecule:programmed cell death 6-interacting protein; PDBTitle: crystal structure of alix/aip1 52 c2v1yB_ not modelled 8.6 9 PDB header:transferase Chain: B: PDB Molecule:phosphatidylinositol 3-kinase regulatory subunit alpha; PDBTitle: structure of a phosphoinositide 3-kinase alpha adaptor-2 binding domain (abd) in a complex with the ish2 domain3 from p85 alpha 53 c2k10A_ not modelled 8.5 26 PDB header:antimicrobial protein Chain: A: PDB Molecule:ranatuerin-2csa; PDBTitle: confirmational analysis of the broad-spectrum antibacterial2 peptide, rantuerin-2csa: identification of a full length3 helix-turn-helix motif 54 d1yzma1 not modelled 8.4 31 Fold:Long alpha-hairpin Superfamily:Rabenosyn-5 Rab-binding domain-like Family:Rabenosyn-5 Rab-binding domain-like 55 c2x7aB_ not modelled 8.4 11 PDB header:immune system Chain: B: PDB Molecule:bone marrow stromal antigen 2; PDBTitle: structural basis of hiv-1 tethering to membranes by the2 bst2-tetherin ectodomain 56 c3n4xB_ not modelled 8.4 14 PDB header:replication Chain: B: PDB Molecule:monopolin complex subunit csm1; PDBTitle: structure of csm1 full-length 57 c2dohC_ not modelled 8.3 40 PDB header:hydrolase Chain: C: PDB Molecule:plasminogen-binding group a streptococcal m-like protein PDBTitle: the x-ray crystallographic structure of the angiogenesis inhibitor,2 angiostatin, bound a to a peptide from the group a streptococcal3 surface protein pam 58 c1t2kD_ not modelled 8.3 15 PDB header:transcription/dna Chain: D: PDB Molecule:cyclic-amp-dependent transcription factor atf-2; PDBTitle: structure of the dna binding domains of irf3, atf-2 and jun2 bound to dna 59 d2c52b1 not modelled 8.2 15 Fold:Nuclear receptor coactivator interlocking domain Superfamily:Nuclear receptor coactivator interlocking domain Family:Nuclear receptor coactivator interlocking domain 60 c2doiB_ not modelled 8.2 40 PDB header:hydrolase Chain: B: PDB Molecule:plasminogen-binding group a streptococcal m-like protein PDBTitle: the x-ray crystallographic structure of the angiogenesis inhibitor,2 angiostatin, bound to a peptide from the group a streptococcus3 protein pam 61 c2doiC_ not modelled 8.2 40 PDB header:hydrolase Chain: C: PDB Molecule:plasminogen-binding group a streptococcal m-like protein PDBTitle: the x-ray crystallographic structure of the angiogenesis inhibitor,2 angiostatin, bound to a peptide from the group a streptococcus3 protein pam 62 c1i5kD_ not modelled 8.1 40 PDB header:blood clotting Chain: D: PDB Molecule:m protein; PDBTitle: structure and binding determinants of the recombinant kringle-2 domain2 of human plasminogen to an internal peptide from a group a3 streptococcal surface protein 63 c1i5kC_ not modelled 8.1 40 PDB header:blood clotting Chain: C: PDB Molecule:m protein; PDBTitle: structure and binding determinants of the recombinant kringle-2 domain2 of human plasminogen to an internal peptide from a group a3 streptococcal surface protein 64 c1bg1A_ not modelled 8.1 15 PDB header:transcription/dna Chain: A: PDB Molecule:protein (transcription factor stat3b); PDBTitle: transcription factor stat3b/dna complex 65 d1k8ib2 not modelled 8.0 19 Fold:MHC antigen-recognition domain Superfamily:MHC antigen-recognition domain Family:MHC antigen-recognition domain 66 c1ci6A_ not modelled 7.9 6 PDB header:transcription Chain: A: PDB Molecule:transcription factor atf-4; PDBTitle: transcription factor atf4-c/ebp beta bzip heterodimer 67 c2kj4B_ not modelled 7.5 40 PDB header:blood clotting Chain: B: PDB Molecule:vek-30; PDBTitle: solution structure of the complex of vek-30 and plasminogen2 kringle 2 68 c1junB_ not modelled 7.4 24 PDB header:transcription regulation Chain: B: PDB Molecule:c-jun homodimer; PDBTitle: nmr study of c-jun homodimer 69 d2gqba1 not modelled 7.4 18 Fold:RPA2825-like Superfamily:RPA2825-like Family:RPA2825-like 70 c1uo3B_ not modelled 7.4 36 PDB header:four helix bundle Chain: B: PDB Molecule:general control protein gcn4; PDBTitle: structure based engineering of internal molecular surfaces2 of four helix bundles 71 c1u9fC_ not modelled 7.3 36 PDB header:transcription Chain: C: PDB Molecule:general control protein gcn4; PDBTitle: heterocyclic peptide backbone modification in gcn4-pli based coiled2 coils: replacement of k(15)l(16) 72 c1u9fB_ not modelled 7.3 36 PDB header:transcription Chain: B: PDB Molecule:general control protein gcn4; PDBTitle: heterocyclic peptide backbone modification in gcn4-pli based coiled2 coils: replacement of k(15)l(16) 73 c1vmaA_ not modelled 7.3 13 PDB header:protein transport Chain: A: PDB Molecule:cell division protein ftsy; PDBTitle: crystal structure of cell division protein ftsy (tm0570) from2 thermotoga maritima at 1.60 a resolution 74 c1o8tA_ not modelled 7.3 19 PDB header:lipid transport Chain: A: PDB Molecule:apolipoprotein c-ii; PDBTitle: global structure and dynamics of human apolipoprotein cii2 in complex with micelles: evidence for increased mobility3 of the helix involvved in the activation of lipoprotein4 lipase. 75 c1unuA_ not modelled 7.3 36 PDB header:four helix bundle Chain: A: PDB Molecule:general control protein gcn4; PDBTitle: structure based engineering of internal molecular surfaces2 of four helix bundles 76 c1unuB_ not modelled 7.3 36 PDB header:four helix bundle Chain: B: PDB Molecule:general control protein gcn4; PDBTitle: structure based engineering of internal molecular surfaces2 of four helix bundles 77 c1uo5A_ not modelled 7.2 36 PDB header:four helix bundle Chain: A: PDB Molecule:general control protein gcn4; PDBTitle: structure based engineering of internal molecular surfaces2 of four helix bundles 78 c1uo5B_ not modelled 7.2 36 PDB header:four helix bundle Chain: B: PDB Molecule:general control protein gcn4; PDBTitle: structure based engineering of internal molecular surfaces2 of four helix bundles 79 c2kxoA_ not modelled 7.2 38 PDB header:cell cycle Chain: A: PDB Molecule:cell division topological specificity factor; PDBTitle: solution nmr structure of the cell division regulator mine protein2 from neisseria gonorrhoeae 80 c1u9fD_ not modelled 7.1 36 PDB header:transcription Chain: D: PDB Molecule:general control protein gcn4; PDBTitle: heterocyclic peptide backbone modification in gcn4-pli based coiled2 coils: replacement of k(15)l(16) 81 c1yybA_ not modelled 7.1 50 PDB header:apoptosis Chain: A: PDB Molecule:programmed cell death protein 5; PDBTitle: solution structure of 1-26 fragment of human programmed2 cell death 5 protein 82 c1gd2G_ not modelled 7.1 13 PDB header:transcription/dna Chain: G: PDB Molecule:transcription factor pap1; PDBTitle: crystal structure of bzip transcription factor pap1 bound2 to dna 83 c1untA_ not modelled 7.0 36 PDB header:four helix bundle Chain: A: PDB Molecule:general control protein gcn4; PDBTitle: structure based engineering of internal molecular surfaces2 of four helix bundles 84 c2kesA_ not modelled 7.0 16 PDB header:protein binding Chain: A: PDB Molecule:synphilin-1; PDBTitle: solution structure of the coiled-coil domain of synphilin-1 85 c1m1jA_ not modelled 7.0 10 PDB header:blood clotting Chain: A: PDB Molecule:fibrinogen alpha subunit; PDBTitle: crystal structure of native chicken fibrinogen with two different2 bound ligands 86 c1untB_ not modelled 6.9 36 PDB header:four helix bundle Chain: B: PDB Molecule:general control protein gcn4; PDBTitle: structure based engineering of internal molecular surfaces2 of four helix bundles 87 d1fxkc_ not modelled 6.8 9 Fold:Long alpha-hairpin Superfamily:Prefoldin Family:Prefoldin 88 c3a7pB_ not modelled 6.7 15 PDB header:protein transport Chain: B: PDB Molecule:autophagy protein 16; PDBTitle: the crystal structure of saccharomyces cerevisiae atg16 89 c3jqhA_ not modelled 6.7 45 PDB header:sugar binding protein Chain: A: PDB Molecule:c-type lectin domain family 4 member m; PDBTitle: structure of the neck region of the glycan-binding receptor2 dc-signr 90 c2cceB_ not modelled 6.5 36 PDB header:four helix bundle Chain: B: PDB Molecule:general control protein gcn4; PDBTitle: parallel configuration of pli e20s 91 c2cceA_ not modelled 6.5 36 PDB header:four helix bundle Chain: A: PDB Molecule:general control protein gcn4; PDBTitle: parallel configuration of pli e20s 92 c1gk4A_ not modelled 6.5 18 PDB header:vimentin Chain: A: PDB Molecule:vimentin; PDBTitle: human vimentin coil 2b fragment (cys2) 93 c3kltB_ not modelled 6.5 11 PDB header:structural protein Chain: B: PDB Molecule:vimentin; PDBTitle: crystal structure of a vimentin fragment 94 d2auwa1 not modelled 6.4 25 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:NE0471 C-terminal domain-like 95 c2eqbC_ not modelled 6.4 17 PDB header:endocytosis/exocytosis Chain: C: PDB Molecule:rab guanine nucleotide exchange factor sec2; PDBTitle: crystal structure of the rab gtpase sec4p, the sec2p gef2 domain, and phosphate complex 96 d1fxka_ not modelled 6.4 11 Fold:Long alpha-hairpin Superfamily:Prefoldin Family:Prefoldin 97 c3qh9A_ not modelled 6.1 13 PDB header:structural protein Chain: A: PDB Molecule:liprin-beta-2; PDBTitle: human liprin-beta2 coiled-coil 98 c1unvA_ not modelled 6.1 38 PDB header:four helix bundle Chain: A: PDB Molecule:general control protein gcn4; PDBTitle: structure based engineering of internal molecular surfaces2 of four helix bundles 99 c2e7sM_ not modelled 6.1 15 PDB header:endocytosis/exocytosis Chain: M: PDB Molecule:rab guanine nucleotide exchange factor sec2; PDBTitle: crystal structure of the yeast sec2p gef domain