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 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2021 Jul 31

Fold library idPDB HeaderMoleculeTitle
c7lx0X_ 2.96 photosynthesis Chain: X: photosystem one psax;
c7rb9D_ 3.76 motor protein/atp binding protein Chain: D: isoform 3 of unconventional myosin-xv;
c7a1iC_ 1.87 peptide binding protein Chain: C: bilbo1_n domain-containing protein;
c6zzxK_ 2.70 photosynthesis Chain: K: photosystem i reaction center subunit chloroplastic;
c7k5cF_ 2.70 viral protein Chain: F: peptidoglycan transglycosylase gp16;
c6zzy1_ 3.16 photosynthesis Chain: 1: chlorophyll a-b binding protein, chloroplastic;
c7e78B_ 2.21 isomerase Chain: B: glucose-6-phosphate isomerase;
c6zzx5_ 2.70 photosynthesis Chain: 5: chlorophyll a-b binding protein, chloroplastic;
c7rj1C_ 2.16 transferase Chain: C: chorismate mutase;
c7reuB_ 2.79 lyase Chain: B: 3-deoxy-d-arabino-heptulosonate-7-phosphate (dahp)
c7eebI_ 2.90 protein transport Chain: I: ef-hand calcium-binding domain-containing protein 9;
c7om6A_ 2.18 viral protein Chain: A: rna-dependent rna polymerase;
c7n6iB_ 3.90 dna binding protein/dna Chain: B: tniq (homology model);
c7m9bB_ 3.80 dna binding protein/dna Chain: B: tnsc;
c7lx0K_ 2.96 photosynthesis Chain: K: photosystem i reaction center subunit psak;
c7f3wD_ 2.86 oxidoreductase Chain: D: cytochrome p450;
c7lc2E_ 2.70 oncoprotein, hydrolase Chain: E: target of rapamycin complex 2 subunit mapkap1;
c7lz0A_ 2.29 membrane protein Chain: A: glutamate receptor 3.4;
c7nnpD_ 3.20 membrane protein Chain: D: potassium-transporting atpase kdpf subunit;
c7eebM_ 2.90 protein transport Chain: M: transmembrane protein 262;
c7rg1B_ 1.85 transport protein/viral protein Chain: B: orf4b;
c7luuA_ 1.68 hydrolase Chain: A: subclass b3 metallo-beta-lactamase;
c6zzyG_ 3.16 photosynthesis Chain: G: photosystem i reaction center subunit chloroplastic;
c6zzx3_ 2.70 photosynthesis Chain: 3: glutathione reductase;
c7o78B_ 1.58 lyase Chain: B: polysaccharide lyase from pseudopedobacter saltans,
c6zzxI_ 2.70 photosynthesis Chain: I: photosystem i reaction center subunit viii;
c7rfzB_ 1.95 transport protein/viral protein Chain: B: orf4b;
c7eevA_ 2.15 hydrolase Chain: A: gtp cyclohydrolase ii;
c7a4p8_ 4.20 photosynthesis Chain: 8: chlorophyll a-b binding protein, chloroplastic;
c7exsA_ 1.42 oxidoreductase Chain: A: sarcosine oxidase;
c7d8aA_ 2.00 gene regulation Chain: A: phd finger protein 14;
c7mwdA_ 3.70 transferase Chain: A: e3 ubiquitin-protein ligase huwe1;
c7eebG_ 2.90 protein transport Chain: G: cation channel sperm-associated protein subunit delta;
c7lx0W_ 2.96 photosynthesis Chain: W: photosystem one psax;
c7cluB_ 1.90 transferase Chain: B: methyltransferase domain-containing protein;
c7ogtA_ 5.50 cell cycle Chain: A: structural maintenance of chromosomes protein 1;
c7n1nB_ 1.60 viral protein/transcription Chain: B: comr;
c7m1oB_ 1.98 electron transport Chain: B: putative ferredoxin;
c7lzhD_ 3.57 transport protein Chain: D: glutamate receptor 3.4;
c7o7aB_ 1.99 lyase Chain: B: aliginate lyase;
c7lvsF_ 2.02 transcription Chain: F: cbp/p300-interacting transactivator 2,hypoxia-inducible
c7e76A_ 2.65 isomerase Chain: A: glucose-6-phosphate isomerase;
c7k04E_ 9.25 nuclear protein/dna Chain: E: dna repair protein rad33;
c7p14A_ 3.66 membrane protein Chain: A: xk-related protein;
c7o52U_ 2.41 immune system Chain: U: cd22 d6-d7 ig domains;
c7jlyA_ 1.73 rna binding protein Chain: A: rna-binding protein;
c7ji1A_ UNK toxin Chain: A: adp-ribosyl cyclase / cyclic adp-ribose hydrolase;
c7el1E_ 2.22 unknown function Chain: E: 100aa;
c7o79A_ 1.93 lyase Chain: A: poly(beta-d-mannuronate) lyase;
c6xrwB_ 1.77 toxin/antitoxin Chain: B: ribbon-helix-helix protein, copg family;
c6xrwC_ 1.77 toxin/antitoxin Chain: C: plasmid stabilisation system protein;
c6zzxM_ 2.70 photosynthesis Chain: M: photosystem i reaction center subunit xii;
c6zzx4_ 2.70 photosynthesis Chain: 4: lhca4;
c7rfyA_ 2.50 transport protein/viral protein Chain: A: importin subunit alpha-3;
c7eebE_ 2.90 protein transport Chain: E: cation channel sperm-associated protein subunit beta;
c6zzy7_ 3.16 photosynthesis Chain: 7: chlorophyll a-b binding protein, chloroplastic;
c7lx0k_ 2.96 photosynthesis Chain: K: photosystem i reaction center subunit psak;
c7d27A_ 2.48 ligase Chain: A: udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2,6-
c7k04A_ 9.25 nuclear protein/dna Chain: A: dna repair protein rad4;
c6zu0B_ 3.40 transferase Chain: B: citrate synthase;
c6zrwE_ 1.35 carbohydrate Chain: E: mucin-binding lectin 1;
c7rgrA_ 2.48 hydrolase Chain: A: artificial protein l056;
c6zzx2_ 2.70 photosynthesis Chain: 2: chlorophyll a-b binding protein, chloroplastic;
c7a4pJ_ 4.20 photosynthesis Chain: J: photosystem i reaction center subunit ix;
c7k5cI_ 2.70 viral protein Chain: I: internal virion protein gp15;
c7eebC_ 2.90 protein transport Chain: C: cation channel sperm-associated protein 3;
c7e7lB_ 3.53 lyase Chain: B: hydroxyphenylacetic acid decarboxylase;
c7eebH_ 2.90 protein transport Chain: H: cation channel sperm-associated protein subunit epsilon;
c7a4pI_ 4.20 photosynthesis Chain: I: photosystem i reaction center subunit viii;
c7ogtB_ 5.50 cell cycle Chain: B: structural maintenance of chromosomes protein 3;
c7rh8A_ 1.69 transferase Chain: A: uracil phosphoribosyltransferase;
c7lp5A_ UNK ligase Chain: A: angiomotin,e3 ubiquitin-protein ligase nedd4-like;
c7eebA_ 2.90 protein transport Chain: A: enhanced green fluorescent protein,cation channel sperm-
c7eebJ_ 2.90 protein transport Chain: J: transmembrane protein 249;
c7dnsB_ 2.33 de novo protein Chain: B: de novo designed protein;
c6zzx9_ 2.70 photosynthesis Chain: 9: chlorophyll a-b binding protein, chloroplastic;
c7eebF_ 2.90 protein transport Chain: F: cation channel sperm-associated protein subunit gamma 2;
c7biiB_ 3.04 ligase Chain: B: e3 ubiquitin-protein ligase huwe1;
c7rgeA_ 2.38 oxidoreductase Chain: A: 3'-phosphoadenylylsulfate reductase;
c7p7xA_ 2.00 transferase Chain: A: aminotransferase class iv;
c6zzyI_ 3.16 photosynthesis Chain: I: photosystem i reaction center subunit viii;
c7eebL_ 2.90 protein transport Chain: L: kazal-like domain-containing protein;
c6zzxO_ 2.70 photosynthesis Chain: O: photosystem i subunit o;
c7nufC_ 2.00 transcription Chain: C: 018;
c6zzyH_ 3.16 photosynthesis Chain: H: photosystem i reaction center subunit vi-chloroplastic-
c7eebD_ 2.90 protein transport Chain: D: cation channel sperm-associated protein 4;
c7lx0T_ 2.96 photosynthesis Chain: T: photosystem i reaction center subunit psak;
c7a4pM_ 4.20 photosynthesis Chain: M: photosystem i reaction center subunit xii;
c7o7tA_ 2.05 lyase Chain: A: poly(beta-d-mannuronate) lyase;
c7l1yA_ 1.20 hydrolase Chain: A: exo-b-1,4-beta-xylanase;
c7lx0x_ 2.96 photosynthesis Chain: X: photosystem one psax;
c7nnlD_ 3.10 membrane protein Chain: D: potassium-transporting atpase kdpf subunit;
c7eebB_ 2.90 protein transport Chain: B: cation channel sperm-associated protein 2;
c7rfxB_ 2.10 transport protein/viral protein Chain: B: orf4b;
c6zzyM_ 3.16 photosynthesis Chain: M: photosystem i reaction center subunit xii;
c7eebK_ 2.90 protein transport Chain: K: cation channel sperm-associated protein subunit zeta;


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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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