Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7k04A_

Fold library idPDB HeaderMoleculeTitle
c7k04A_9.25PDB header: nuclear protein/dnaChain: A: PDB Molecule: dna repair protein rad4;


Added to library: Sat Jul 31 08:38:50 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence YDSEEFEDVTDGNEVRNVCSNEERKRRKYFHMLYLVCLMVHGFIRNEWINSKRLSRKLSNLVPEKVFELL
Predicted secondary structure


















SS confidence





































































Known secondary structure (DSSP)
S













T
TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence HPQKDEELPLRSTRKLLDGLKKCMELWQKHWKITKKYDNEGLYMRTWKEIEMSANNKRKFKTLKRSDFLR
Predicted secondary structure











































SS confidence





































































Known secondary structure (DSSP) S



SS




SSSTTS


S







 .........150.........160.........170.........180.........190.........200.........210
Sequence AVSKGHGDPDISVQGFVAMLRACNVNARLIMSCQPPDFTNMKIDTSLNGNNAYKDMVKYPIFWCEVWDKF
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP) T
TT





TT


S





TTTTS
STT
 .........220.........230.........240.........250.........260.........270.........280
Sequence SKKWITVDPVNLKTIEQVRLHSKLAPKGVACCERNMLRYVIAYDRKYGCRDVTRRYAQWMNSKVRKRRIT
Predicted secondary structure

















































SS confidence





































































Known secondary structure (DSSP) TTSSSS


SS

TTS

STTGGGT




TTS


TTTTTTGGGGSGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence KDDFGEKWFRKVITALHHRKRTKIDDYEDQYFFRRDESEGIPDSVQDLKNHPYYVLEQDIKQTQIVKPGC
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP) GS

S



S
SSSGGGTT
SSGGGS
TT
TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence KECGYLKVHGKVGKVLKVYAKRDIADLKSARQWYMNGRILKTGSRCKKVIKRTVEEDERLYSFEDTELYI
Predicted secondary structure














































SS confidence





































































Known secondary structure (DSSP)

S
TTSTT
GGG
B
TT
TT


S






B
GGG

 .........430.........440.........450.........460.........470.........480.........490
Sequence PPLASASGEITKNTFGNIEVFAPTMIPGNCCLVENPVAIKAARFLGVEFAPAVTSFKFERGSTVKPVLSG
Predicted secondary structure








































SS confidence





































































Known secondary structure (DSSP)




TT





TTS

SSGGGS
TT
TTT


STT
 .........500.........510.........520....
Sequence IVVAKWLREAIETAIDGSWNTLLLKLRIRSKLNS
Predicted secondary structure

SS confidence

































Known secondary structure (DSSP) GGG



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D