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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7mwdA_

Fold library idPDB HeaderMoleculeTitle
c7mwdA_3.70PDB header: transferaseChain: A: PDB Molecule: e3 ubiquitin-protein ligase huwe1;


Added to library: Sat Jul 31 09:00:49 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ADCRALIDKLKDEQLLLELQWVDLLDRFDGILADAGQQLKMLLLAVLNFTALLIEYSSIEHLTTLLASSD
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Known secondary structure (DSSP)








TT


TS
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence MQVVLAVLNLLYVFSKRSNYITRLGSDKRTPLLTRLQHLAESWGGKENGFGLAECCRDLHMMKYPPSATT
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Known secondary structure (DSSP)

TTTSS
TTTS


BGGGTB
S
GGGTSS
TTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence LHFEFYIHIEQLDKISESPSEIMESLTKMYSIPKDKQMLLFTHIRLAHGFSNHRKRLQAVQARLHAISIL
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Known secondary structure (DSSP)


S
SGGG
S
S


TT
TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence VYSSILYNGLIEELVDVLQITDKQLMEIKAASLRTLTSIVHKLSSIIDCTGTASYHGFLPVLVRNCIQAM
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Known secondary structure (DSSP)




TT

SSTT

TTTSSSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence IDPSMDPYPHQFATALFSFLYHLASYDAGGEALVSCGMMEALLKVIKFLGDEQDQITFVTRAVRVVDLIT
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Known secondary structure (DSSP) SSSS



TSTT

SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence NLDMAAFQSHSGLSIFIYRLEHEVDLCRKECPFVIKQCIPQRAALLKSMLNFLKKAIQDPAFSDGIRHVM
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Known secondary structure (DSSP) TT

TT








TSTTSTTTGGGTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence DGSLPTSLKHIISNAEYYGPSLFLLATEVVTVFVFQEPSLLSSLQDNGLTDVMLHALLIKDVPATREVLG
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Known secondary structure (DSSP) TSSTTTTTS

GGGTTTTS




 .........500.........510.........520.........530.........540.........550.........560
Sequence SLPNVFSALCLNARGLQSFVQCQPFERLFKVLLSPDYLPAMRRRRSSDPLGDTASNLGSAVDELMRHQPT
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Known secondary structure (DSSP) GGGST
GGGGG
GGGS
STTTS
TTSGG
 .........570.........580.........590.........600.........610.........620.........630
Sequence LKTDATTAIIKLLEEICNLGRDPKYICQKIPIPLMDYILNVMKFVESILSNNTTDDHCQEFVNQKGLLPL
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Known secondary structure (DSSP) GSTT




S
SSSTT
 .........640.........650.........660.........670.........680.........690.........700
Sequence VTILGLPNLPIDFPTSAACQAVAGVCKSILTLSHEPKVLQEGLLQLDSILSSLEPLHRPIESPGGSVLLR
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Known secondary structure (DSSP) GGG
TTS
TTSTTS

TTT
GGGTS

SSS


 .........710.........720.........730.........740.........750.........760.........770
Sequence ELACAGNVADATLSAQATPLLHALTAAHAYIMMFVHTCRVGQSEIRSISVNQWGSQLGLSVLSKLSQLYC
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Known secondary structure (DSSP) TSTT
TTGGG
TTT
S


TS
 .........780.........790.........800.........810.........820.........830.........840
Sequence SLVWESTVLLSLCTPNSLPSGCEFGQADMQKLVAMAARIKQIKPLLSASSRLGRALAELFGLLVKLCVGP
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Known secondary structure (DSSP) S
SSSS
S

SS




 .........850.........860.........870.........880.........890.........900.........910
Sequence AARSTASALTKLLTKGLSWQPPPYTPTPRFRLTFFICSVGFTSPMLFDERKYPYHLMLQKFLCSGGHNAL
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Known secondary structure (DSSP)




TT
S
TB
TTS
B
SSS
 .........920.........930.........940.........950.........960.........970.........980
Sequence FETFNWALSMGGKVPVSEGLEHSDLPDGTGEFLDAWLMLVEKMVNPTTVLESPHSLPAKNFPQFSALRFL
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Known secondary structure (DSSP) TTTTS
TT
TT

TT
TS
TT










 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence VVTQKAAFTCIKNLWNRKPLKVYGGRMAESMLAILCHILRGEPVIREREQDELHTFTDTMLPGCFHLLDE
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Known secondary structure (DSSP) TTSSS


SSSSTT

 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence LPDTVYRVCDLIMTAIKRNGADYRDMILKQVVNQVWEAADVLIKAALPLTTSDTKTVSEWISQMATLPQA
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Known secondary structure (DSSP)
GGGS
T
S

SS
SS
SSS
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence SNLATRILLLTLLFEELKLPCAWVVESSGILNVLIKLLEVVQPCLQAAKEQKEVQTPKWITPVLLLIDFY
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Known secondary structure (DSSP) ST
T




TT
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence EKTAISSKRRAQMTKYLQSNSNNWRWFDDRSGRWCSYSASNNSTIDSAWKSGETSVRFTAGRRRYTVQFT
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Known secondary structure (DSSP) TTS
SSS

TTTT

TT
STTTT
 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence TMVQVNEETGNRRPVMLTLLILIQGLTEDMVTVLIRACVSMLGVPVDPDTLHATLRLCLRLTRDHKYAMM
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Known secondary structure (DSSP) TTTTT











TT

TTS
 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence FAELKSTRMILNLTQSSGFNGFTPLVTLLLRHIIEDPCTLRHTMEKVVRSAATSGAGSTTSGVVSGSLGS
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Known secondary structure (DSSP) TT
BGGG

TT

S



TT


TT
SSGG
 .........1410.........1420.........1430.........1440.........1450.........1460.........1470
Sequence REINYILRVLGPAACRNPDIFTEVANCCIRIALPAPRGSGTASDDEFENLRIKGPNAVQLVKTTPLKPSP
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Known secondary structure (DSSP) GBT





SSS
TTTSSSS


B






 .........1480.........1490.........1500.........1510.........1520.........1530.........1540
Sequence LPVIPDTIKEVIYDMLNALASKPLMPTSTILRLLAELVRSYVGIATLIANYSYTVGQSELIKEDCSVLAF
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Known secondary structure (DSSP)







BSS


B

TTSSTT

S

B
 .........1550.........1560.........1570.........1580.........1590.........1600.........1610
Sequence VLDHLLPHTQNAEDKDTPALARLFLASLAAAGSGTDAQVALVNEVKAALGRALAMAESTEKHARLQAVMC
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Known secondary structure (DSSP) TTSS

SS
SSTTS

TTS
SS
 .........1620.........1630.........1640.........1650.........1660.........1670.........1680
Sequence IISTIMENNIIRLFLKKGLVNDLARVPHSLDLSSPNMANTVNAALKPLETLSRIVNQLSSIPTALTRWTE
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Known secondary structure (DSSP)

TTTGGGGS
TT
TT

TTS

 .........1690.........1700.........1710.........1720.........1730.........1740.........1750
Sequence ECKVLDAESMHDCVSVVKVSIVNHLEFLRDEELEERREKRRKQLLLDHEALSCLLVLLFVDEPKLNTSRL
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Known secondary structure (DSSP)
TT


S
GGGTS

SSS
 .........1760.........1770.........1780.........1790.........1800.........1810.........1820
Sequence HRVLRNLCYHAQTRHWVIRSLLSILQRSSSWLSVSMDAALGCRTNIFQIQTVHIHPQAAPVVCRHVLDTL
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Known secondary structure (DSSP) TTS





TTS


TTT
 .........1830.........1840.........1850.........1860.........1870.........1880.........1890
Sequence IQLAKVDFWDLLVKLDNMEASPLGQLMNMLSHPVIRRSSLLTEKLLRLLSLISIGLTENQLQLSVEVLTS
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Known secondary structure (DSSP)




STGGGS
T




 .........1900.........1910.........1920.........1930.........1940.........1950.........1960
Sequence EEGLEDAANVLLQLSRGDSGTRDTVLKLLLNGARHLGYTLCKQIGTLLAELREYNLEELQLPSMSMLTSK
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Known secondary structure (DSSP) TT






GGGST
 .........1970.........1980.........1990.........2000.........2010.........2020.........2030
Sequence TSTQKFFLRVLQVIIQLRDLSLDELWDMLGECLKELEESHDQHAVLVLQPAVEAFFLVHATEQKFLRFAE
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Known secondary structure (DSSP) T




TTT
SGGGGGGSS


 .........2040.........2050.........2060.........2070.........2080.........2090.........2100
Sequence THRTVLNQILRQSTTHLADGPFAVLVDYIRVLDFDVKRKYFRQELERLDEGLRKEDMAVHVRRDHVFEDS
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Known secondary structure (DSSP) T

S
TTTSGGGGGGS
GGGS
TTTS



TTT
 .........2110.........2120.........2130.........2140.........2150.........2160.........2170
Sequence YRELHRKSPEEMKNRLYIVFEGEEGQDAGGLLREWYMIISREMFNPMYALFRTSPGDRVTYTINPSSHCN
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Known secondary structure (DSSP) TTS
TSTT




TT
TTTT


TTTSSSB
TTGGGS
 .........2180.........2190.........2200.........2210.........2220.........2230.........2240
Sequence PNHLSYFKFVGRIVAKAVYDNRLLECYFTRSFYKHILGKSVRYTDMESEDYHFYQGLVYLLENDVSTLGY
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Known secondary structure (DSSP) TTT





B
T



GGG
TTS
GGGTSS
 .........2250.........2260.........2270.........2280.........2290.........2300.........2310
Sequence DLTFSTEVQEFGVCEVRDLKVTEENKKEYVHLVCQMRMTGAIRKQLAAFLEGFYEIIPKRLISIFTEQEL
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Known secondary structure (DSSP)


STT



TTTGGGS
TTS
 .........2320.........2330.........2340.........2350.........2360.........2370.........2380
Sequence ELLISGLPTIDIDDLKSNTEYHKYQSNSIQIQWFWRALRSFDQADRAKFLQFVTGTSKVPLQGFAALEGM
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Known secondary structure (DSSP) T





TSSS
TT
S
S




TT
GGG
T
 .........2390.........2400.........2410.........2420.......
Sequence NGIQKFQIHRDDRSTDRLPSAHTCFNQLDLPAYESFEKLRHMLLLAI
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Known secondary structure (DSSP) T


S
TTS

TTTT

S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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