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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7o79A_

Fold library idPDB HeaderMoleculeTitle
c7o79A_1.93PDB header: lyaseChain: A: PDB Molecule: poly(beta-d-mannuronate) lyase;


Added to library: Sat Jul 31 08:43:05 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GNIQVKNASELNKAIGSAVAGDAILMQPGEWKDVKILFNSKASKAKPITLKADQAGKVMLSGESSLSFDA
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Known secondary structure (DSSP)


S

TT

SS





SSS
SSTT
S

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence PYLVVEGLLFKDGSLKKGSVIQFNSDYCKLENTAIVDFNPSQKSTGYYWVLFRGNNNLMQYCSFKGKNNM
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Known secondary structure (DSSP) SSS


SSS
SSS
S
S


SSTTS


SSS
S



SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence QPLVGNDQDNSRYNTVQYCYFKDIPYTPDNGREIFRIWGYGRSEETGDDGAFFTIKNNLFERAHGEGMEI
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Known secondary structure (DSSP) S
S
SSS

S
S







TT

S
STTTT


SS




S
S

TTSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence ISLKSNRNKVIGNTVISTKGGIVGRSGNFNTIEENFIFGENEKGSYGIRLAGQGHHVVNNYVRDVDGDGL
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Known secondary structure (DSSP) SSS
S
S
S
SS
S

TT
TT
SSS
S
S
SS
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence ILICGEYIEKALTDKYEPILRAGTPLGRVPRYGHVKDGLYVNNTFLNVGGAGINIGGSYNGNPGADQRML
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Known secondary structure (DSSP)
B


SS
SSTT



TTSSSS
SS


BS
S
SS
SS

SS
SS



B
 .........360.........370.........380.........390.........400.........410.........420
Sequence LPENNTITHNIISTKSGKNAIQATSPSQNPILANFKFKSNILGSNLVYDNGAEPDTSKPGVRIKNKPLSS
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Known secondary structure (DSSP)

BS
S
TTS

S





GGGTT









TTS





SS
SS





T
 .........
Sequence KEVGVKWSI
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Known secondary structure (DSSP) TSSS
SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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