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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7eebG_

Fold library idPDB HeaderMoleculeTitle
c7eebG_2.90PDB header: protein transportChain: G: PDB Molecule: cation channel sperm-associated protein subunit delta;


Added to library: Sat Jul 31 08:33:45 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence HTLCRVHTVRTGKVFKSNIQLQGDPLFYAFPNTFVLKNVCKADISVYLGQKVFLTIDNFESSLLPLTVPK
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Known secondary structure (DSSP)

SS


S
SS






S
SSSS

SS
TT
SSS
SSSS
S
B



S
 .........80.........90.........100.........110.........120.........130.........140
Sequence SLAVGVPSITSAHFVSGSLVLFVISGKGYSYDYYENTWRKLEGISEPVSHISGDVCCFKGSFCLELSNNL
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Known secondary structure (DSSP) TT

SS


SSSTTSSS


SS

S

S



SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence FAYLRGGQIPGTNIYFSDNGGFSFQLMNTDKLSHLTGTLGGIFHLHSMSQVGVLMVENNLGTFHYMEYPL
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Known secondary structure (DSSP)
TT
BTTT

SSTTT


GGGGTT

STTTTSSS
SSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence NHSMGIAFSYKNLLEVIMKPYQRGFMVLWNQKSILVSSNSGQIVEHVRLIDQKIFTDLDVEHANINIYSV
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Known secondary structure (DSSP) TT



SS


TT
SS
TTSSSSSS

TT

T

 .........290.........300.........310.........320.........330.........340.........350
Sequence ASNAYELAFLVAEDHLYYGSQSYMGTYVIKLPHQPLWSTHTSIYFEDIGILQVLTPVADPHFAAYDFDKC
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Known secondary structure (DSSP)
SS
TTT

TT









SS
TT

TTT
SB
 .........360.........370.........380.........390.........400.........410.........420
Sequence TVNVQSSLMDEKLALQPCNVELLESTMINTMFTIDMNSKLKLSALMIPRKGENPTPLVMVSNPHALGFKA
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Known secondary structure (DSSP) TT
TTT




S
STTSS

TT


SS



S
TTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence NLNEFGNTFDGNSKYKLDIELKQQHHWGNSDFNFTASIKRHAISSVTVDIADKTLSCVDLKPLSTLISVG
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Known secondary structure (DSSP)
TTS
S
S


SSS
TT

SS
SSS

S
 .........500.........510.........520.........530.........540.........550.........560
Sequence CDMTKKIVVQNKISACTMGILNPVQLQKNYTYTIEKEAYDDDLIVFYEYKDLGCPRLVYYDKPWKPVVEL
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Known secondary structure (DSSP)

TT


SSBSTTTTS

TT


S
S







S
SSS
B


 .........570.........580.........590.........600.........610.........620.........630
Sequence WKNGIVEEIMNAEYVISEINGLVTYSYSLTAATANCRSQPQNWSTFLWNRENYVSCHEDNKDNPLLWPNV
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Known secondary structure (DSSP) TT

S
SS



S
BTTTSS
SS



TTT



TTT


SSS


SS
SS



 .........640.........650.........660.........670.........680.........690.........700
Sequence EYQVLGGQTNNKIIFGQRNGIYTFHLSVVDPYYSYCNLNTIFSVYVHGALPVTKFQPLLTILLMVTTTLL
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Known secondary structure (DSSP) B


BSTT




S

S

TTT
SS









S

S
 .........710....
Sequence TAWLAYAIPKQLRS
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Known secondary structure (DSSP) T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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