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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7o7tA_

Fold library idPDB HeaderMoleculeTitle
c7o7tA_2.05PDB header: lyaseChain: A: PDB Molecule: poly(beta-d-mannuronate) lyase;


Added to library: Sat Jul 31 08:55:31 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MGLVENIKQFNDAVSSVKPGDEIVLANGSWNDVELVLKGKGLPDKPITLKAQTPGKVIITGQSNLAFSGE
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Known secondary structure (DSSP)

SS

TT

SS


SSS
SSTTSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence YIVISGLVFKDGATPTGEVISFRTSNEDVANHSRVTNTVIDNFSTDLRQMSDLWVAMYGKHNRLDHNSLV
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Known secondary structure (DSSP) SS


SSSSBSSSS
BS
S




SSTT
B

SSS
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence NKRNRGVTVAVRMNSEASRKNHHIIEYNYFGPRQILGANGGETLRIGTSHFSREYSNTTAQYNYFDRTNG
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Known secondary structure (DSSP)


SBS
S

SSGGGSS


S


B


SSS


SS
GGGTTSB


S
SB
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence EHEIISNKSSGNSLIKNVFFETQGTLTMRHGHFTKVEGNYFLGNRKPNTGGIRIINESQTVSNNYMYGLT
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Known secondary structure (DSSP) SSSBS
S
S
S
S

S

TT
TT
SBS
S
S

 .........290.........300.........310.........320.........330.........340.........350
Sequence GKRLRGALVIMNGVPNSPPNRYDPVIDSAMNNNIVIDSDHIELGAGADAERSAAPSTSEFKGNIILGKSN
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Known secondary structure (DSSP)

GGGSS
B
TT

TTS



BS
S
S


T
SSSS
B

BSS

SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence LEPFTLYDDMSGINFEGNYLNDEASTPIKTGFASTPYSVTTNQYGLKSPDKALLDEIGFGEVKLPVTKEE
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Known secondary structure (DSSP) SS

S

TTSTT


S
SSS




TTS


T





SS
GGG
 .........430.........440.........450.........460.........470.........480.........490
Sequence VGADFYPKNEALVAFQSGKTIHVKAGTDTLTSALATSQGGDVLVLENGADYLLTKFAEVHHPVTIMAKAG
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Known secondary structure (DSSP) SS
TTS







TT
S

SST

TT

TT
SS

S

SS
 .........500.........510.........520.........530.........540.........550.........560
Sequence KKPVIRSQKPNFINIENGGALEVENLWFDGAESPDYKGNTIIGTSGYSMNINYNLSVRNVKVTDLDVNGY
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Known secondary structure (DSSP) S

SSS
TT
S

TT

S
TT


SS

SS
S

SSS
 .........570.........580.........590.........600.........610.........620.........630
Sequence FYFFKANAGTFADSIEIIDSEFSNITGAILQLNREVDDLGVYSVENLVISGNTFTNVKEEVVTVYRGGTD
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Known secondary structure (DSSP)

TT

S
SS
S



SSTT

SS
SS
S

SS
 .........640.........650.........660.........670.........680.........690.........700
Sequence ESTFGPMVSVTNNTLTNVGKGSGASMYFHGVQKLNISETKWDNSAPLELFLTNGGPITVIDNVEMKNTDK
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Known secondary structure (DSSP) SSS


S




SS
SS




SS

T


 .........710......
Sequence IRANNDEYESSNVTYD
Predicted secondary structure






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Known secondary structure (DSSP)
B
S
S
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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