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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7om6A_

Fold library idPDB HeaderMoleculeTitle
c7om6A_2.18PDB header: viral proteinChain: A: PDB Molecule: rna-dependent rna polymerase;


Added to library: Sat Jul 31 08:38:19 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TRLSLEAMLAERAMVARQDLAGLKRKLAGADRVLAPQSPEQCGRESAQAQARSVTSELKSAVKEAQGLEH
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Known secondary structure (DSSP)



TT
TTT










SS
S

 .........80.........90.........100.........110.........120.........130.........140
Sequence QTLDFLEQLGEYPVCGILHGDHPVHPSGTHNNNGKVSVKRQFAAGVSDALTCAFRFEDSDLVRETALKTT
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Known secondary structure (DSSP)

STTS



B



TTSS
TTSSTT
B








S
 .........150.........160.........170.........180.........190.........200.........210
Sequence YTDGTWAGFVQRLKMQTTRKCVQEKVSRKLLKQLFPYDPQKLVDVSGELSELVLGIKTNAIASAGPPYWR
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Known secondary structure (DSSP)











S
B
GGGS

TTS
T



TTSB

TTT
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence TKRDALPDMLDCVLPLLYDHIVRKDLTTLRNKHPELFLAECKNKTDRYEVESLGEKTRPYFSHPFHLSAL
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Known secondary structure (DSSP) BTTT

GGGG


STTTTT




 .........290.........300.........310.........320.........330.........340.........350
Sequence VSVLSQSFSGALKIMTEDSTSFNAYGFSWTNGGAEDLAIWARQAGEAGKKPPRIACYGDDTDIYYRKDGK
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Known secondary structure (DSSP) B

TTT
TT

B
TT

STTTT

BTTTS

TTTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence LYRICPDFKQMDGSVDATTIEAVVDYVVDAHVKQYPTARQFWEEVGKLWVEMATQSPFLIDGTKVYRKMQ
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Known secondary structure (DSSP)

BBSSGGGG

SGGGT

SSBS

SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence KDGLMTGVVGTTLFDTVKSALAYNDWADQLMFGSLNLLEEKYAIEFFKNKHGLVIKEGTWKPALVNEDPG
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Known secondary structure (DSSP) S
S

TTSTTTT
GGGGS


B
TT





SS

 .........500.........510.........520.........530.........540.........550.........560
Sequence FGELWTEQKFLGLQLKVVRRENEKVYVPNLPFEDWLTMWVTPRSTETMRERTLFDRARGLLVTGAVFDER
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Known secondary structure (DSSP) TT
BS
S

BTTBTT

S



TGGGS
 .........570.........580.........590.........600.........610.........620.........630
Sequence ARGLMGAVINSTAPEVVCMRVQEISDGYPSYDWVVSLYSRDHPCDMPRVFPEAATLIASYRKQVMDTRVV
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Known secondary structure (DSSP) S
S






B


TT






BSSTTT






TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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