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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7eebE_

Fold library idPDB HeaderMoleculeTitle
c7eebE_2.90PDB header: protein transportChain: E: PDB Molecule: cation channel sperm-associated protein subunit beta;


Added to library: Sat Jul 31 08:35:29 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VIHNKGKERTYFSCSGEGILTGLHTIKLFLTMDNLKVRCFFRNENQSPSKEILGLFTSGGLAPNMIITNS
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Known secondary structure (DSSP)
BTTS






SS



TTS
SS

SSS
S

TTTT



S
 .........80.........90.........100.........110.........120.........130.........140
Sequence TFYGGYYFKLTPFSNRLEWLIDIPRQNITVNTDIAAVEQWMIKITMHEGLNIYDTEGTLLDLVREPILQW
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Known secondary structure (DSSP) S





TTT
SS
GGGTT




S



S
SSS

STTT
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence NLGRVLTEMEVRDLYPEVNDIKVTKSPCANDVALIGFMMKPSSNGVFIGKTISGFWTYKECIWHDLTEII
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Known secondary structure (DSSP)

S

TTTSGGGGGG

SSS
S


TTS
S
SSSSSSSSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence YAELKDEHQGLTVIDLVLTNHFLVILTSLGLYVSSDLRYPTTSQIKLSRAEFCGFERVDYIRGNLWYNEK
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Known secondary structure (DSSP)




S



SS
TTS
SSS

SSS



SS

T


 .........290.........300.........310.........320.........330.........340.........350
Sequence CFANRESFEVDYVTITFNRSSSCFFSKEPFLHWLPCVFSSIPRVITFLIDQETDSGIYLFNVQDTKETYV
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Known secondary structure (DSSP)

SS

TT







S
SS
S

B
S




TTTTTTS

 .........360.........370.........380.........390.........400.........410.........420
Sequence TVAMLKDGKPSPRPKFPSFHFPSTFTLPLGMIFHPRSHFLYVYGSQIWVSMDGGNTFEMLCNLFSHHVTK
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Known secondary structure (DSSP) TT
SS
S

TT



TTS

SSTTTT


SS

 .........430.........440.........450.........460.........470.........480.........490
Sequence TSNSFYTSDIVFIVEDGRILTTKAGLTTYSELGILKDAIFTLYYDQLGYIHKLTPENFDAGSKLLGHGNS
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Known secondary structure (DSSP)
SSTTTTSTT
S




SS

TT

TT

SS

SS

S
 .........500.........510.........520.........530.........540.........550.........560
Sequence GSIFGKRPDLGFEAILVPQYISTNEMYFFAHVPLTMPTNIQWKKRFKTIHLGKTIEFSKTGLANIKNVYM
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Known secondary structure (DSSP)
SSSSS





S
SSSS

TT

GGGGGGGS

GGGTT
SSS
 .........570.........580.........590.........600.........610.........620.........630
Sequence HKTEPVGFQTSIHTEIIVPFGIENSKDSPCLLSDLEITYSGKLYYTIKLLSKNPLHELKSTDVEKSVLIP
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Known secondary structure (DSSP)
SSSSTTSS





TTT
GGGSS

SSS
S


TT
S

SS
SS
T
 .........640.........650.........660.........670.........680.........690.........700
Sequence GYSSFLIMNITDKWTASALATMPQAIKSNLKFLTGSWFLYNFGTAGGRKWSISTRQCNYWIQQDSLDFMS
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Known secondary structure (DSSP) TS

SSSSGGG

S

GGGS

SSTT









STTS
S
 .........710.........720.........730.........740.........750.........760.........770
Sequence LNLVKYIDVGNTIDFQFKIIPKAMSTFPIPPVSMVVGNPGLVEVKTQGVFDLNENYYLDIHVSGRFFQKG
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Known secondary structure (DSSP) SS

TT
SS



SS
S
S
TTS
TT


SS

 .........780.........790.........800.........810.........820.........830.........840
Sequence STSIALVLWEGSSKCYAITLLPTIKSSCSYLRTMHHTPGRHIPPEDWISGVHKDSQGFNMIKTLPINYRP
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Known secondary structure (DSSP)
SSS
TTSS



S

TT


SS





B
SSS
BS

TTB

 .........850.........860.........870.........880.........890.........900.........910
Sequence PSHMGISIPLTDNFYHADPSKPIPRNQFHKSKETGKYKQCANVTSRAMCNCSEHQKFSHAVAFSDCKEKV
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Known secondary structure (DSSP)

SS
TT






BS

SSS

S


SSS


SSS
S
SSTTTS


S

TT
GGG

 .........920.........930.........940.........950.........960.........970.........980
Sequence HRFKFPVTQYPVVLEIFNERDKISAEPPYLVTMTEVNMRKNWQLKHNEPENVKKMKHYLEPLLKTPVYNP
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Known secondary structure (DSSP)
SS

TT

TTS
TT







TTTTTSS

B
T
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence LGLNLTIQGSELFHFKVSVVPGVSFCELSEEFQIYVDEVPLPFPGHALIAVATSVVLGVLIFIAFVFQLR
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Known secondary structure (DSSP) TS


SS
TTS
SS







STTT
 ...
Sequence NIH
Predicted secondary structure


SS confidence


Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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