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 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2020 Dec 05

Fold library idPDB HeaderMoleculeTitle
c6l0hD_ 2.05 hydrolase Chain: D: dihydroorotase;
c6ymvA_ 3.10 transcription Chain: A: dna-directed rna polymerase, mitochondrial;
c7cagC_ 3.78 transport protein Chain: C: abc transporter, atp-binding protein sugc;
c6lcnF_ 2.15 transferase Chain: F: serine o-acetyltransferase;
c6wl1n_ 4.00 protein fibril Chain: N: peptide 36-31-3;
c6wl1U_ 4.00 protein fibril Chain: U: peptide 36-31-3;
c6wl1w_ 4.00 protein fibril Chain: W:
c6v3pD_ 3.25 cell adhesion Chain: D: iga fc receptor;
c6wkyO_ 4.20 protein fibril Chain: O: peptide 29-24-3;
c6zq3A_ 2.40 hydrolase Chain: A: silicatein alpha;
c6lf2A_ 1.60 sugar binding protein Chain: A: sevil;
c6xn0A_ 1.71 hydrolase Chain: A: xylosidase;
c6lklB_ 2.21 signaling protein Chain: B: abc transporter, solute-binding protein;
c6wl0n_ 4.40 protein fibril Chain: N: peptide 36-31-3-rd;
c6za3A_ 2.05 transcription Chain: A: transcriptional regulator, gntr family;
c7cadB_ 3.41 transport protein Chain: B: abc transporter, permease protein sugb;
c7aqhH_ 2.49 viral protein Chain: H: orf007;
c6wl0C_ 4.40 protein fibril Chain: C: peptide 36-31-3-rd;
c7bvkA_ 2.70 oxidoreductase Chain: A: oxidoreductase, nad-binding;
c6wl0Y_ 4.40 protein fibril Chain: Y:
c6wl0J_ 4.40 protein fibril Chain: J: peptide 36-31-3-rd;
c6wl0g_ 4.40 protein fibril Chain: G: peptide 36-31-3-rd;
c7aqoD_ 4.50 rna binding protein Chain: D: tho complex subunit mft1;
c6wkyG_ 4.20 protein fibril Chain: G: peptide 29-24-3;
c7c4mA_ 2.40 oxidoreductase Chain: A: ancestral l-amino acid oxidase;
c7jlvG_ 3.80 immune system Chain: G: disease resistance protein roq1;
c6wl1p_ 4.00 protein fibril Chain: P: peptide 36-31-3;
c6wl1g_ 4.00 protein fibril Chain: G: peptide 36-31-3;
c6y17D_ 1.56 transcription Chain: D: nebulin,nuclear receptor corepressor 1;
c6wkyi_ 4.20 protein fibril Chain: I: peptide 29-24-3;
c6wl1E_ 4.00 protein fibril Chain: E: peptide 36-31-3;
c7aqoJ_ 4.50 rna binding protein Chain: J: bj4_g0025130.mrna.1.cds.1;
c7adpA_ 3.60 membrane protein Chain: A: er membrane protein complex subunit 1;
c6wkyq_ 4.20 protein fibril Chain: Q: peptide 29-24-3;
c6x87X_ 3.20 immune system Chain: X: circumsporozoite protein;
c7jlxC_ 4.60 immune system Chain: C: disease resistance protein roq1;
c6zzzA_ 2.54 protein transport Chain: A: translocation protein sec62;
c6wkyQ_ 4.20 protein fibril Chain: Q: peptide 29-24-3;
c6ysnD_ 3.00 membrane protein Chain: D: maltose/maltodextrin-binding periplasmic protein,short
c6wl1W_ 4.00 protein fibril Chain: W:
c6wl1P_ 4.00 protein fibril Chain: P: peptide 36-31-3;
c6wl0m_ 4.40 protein fibril Chain: M: peptide 36-31-3-rd;
c6xe9A_ 4.30 contractile protein Chain: A: myosin ii heavy chain (smooth muscle);
c6wkym_ 4.20 protein fibril Chain: M: peptide 29-24-3;
c6wkyI_ 4.20 protein fibril Chain: I: peptide 29-24-3;
c7ksmB_ 3.20 hydrolase Chain: B: lon protease homolog, mitochondrial;
c6zxez_ 3.00 ribosome Chain: Z: 40s ribosomal protein s25;
c6wl1N_ 4.00 protein fibril Chain: N: peptide 36-31-3;
c6wl1B_ 4.00 protein fibril Chain: B: peptide 36-31-3;
c6wl0d_ 4.40 protein fibril Chain: D: peptide 36-31-3-rd;
c6wl0E_ 4.40 protein fibril Chain: E: peptide 36-31-3-rd;
c6wl1e_ 4.00 protein fibril Chain: E: peptide 36-31-3;
c7kraI_ 3.20 membrane protein/immune system Chain: I: fab dh4 heavy chain;
c6wl1G_ 4.00 protein fibril Chain: G: peptide 36-31-3;
c7aqoH_ 4.50 rna binding protein Chain: H: tho complex subunit hpr1;
c6zxgk_ 2.60 ribosome Chain: K: 40s ribosomal protein s10;
c6wkyf_ 4.20 protein fibril Chain: F: peptide 29-24-3;
c6wlgA_ 3.11 protein binding Chain: A: integrator complex subunit 3;
c6wy6C_ 1.77 protein transport Chain: C: eh domain-containing and endocytosis protein 1;
c6wl0G_ 4.40 protein fibril Chain: G: peptide 36-31-3-rd;
c6wl0N_ 4.40 protein fibril Chain: N: peptide 36-31-3-rd;
c6wl1r_ 4.00 protein fibril Chain: R: peptide 36-31-3;
c6wl1l_ 4.00 protein fibril Chain: L: peptide 36-31-3;
c6wl0L_ 4.40 protein fibril Chain: L: peptide 36-31-3-rd;
c6wkyg_ 4.20 protein fibril Chain: G: peptide 29-24-3;
c7abaA_ 1.85 biosynthetic protein Chain: A: salcyp;
c6zxfz_ 3.70 ribosome Chain: Z: 40s ribosomal protein s25;
c6wl1d_ 4.00 protein fibril Chain: D: peptide 36-31-3;
c6wl1Q_ 4.00 protein fibril Chain: Q: peptide 36-31-3;
c6wl1m_ 4.00 protein fibril Chain: M: peptide 36-31-3;
c6wl0W_ 4.40 protein fibril Chain: W:
c6wkye_ 4.20 protein fibril Chain: E: peptide 29-24-3;
c6wkyb_ 4.20 protein fibril Chain: B: peptide 29-24-3;
c6wl1u_ 4.00 protein fibril Chain: U: peptide 36-31-3;
c7jluA_ 3.80 immune system Chain: A: disease resistance protein roq1;
c6wl0I_ 4.40 protein fibril Chain: I: peptide 36-31-3-rd;
c6wl0k_ 4.40 protein fibril Chain: K: peptide 36-31-3-rd;
c6wkyD_ 4.20 protein fibril Chain: D: peptide 29-24-3;
c6wl0b_ 4.40 protein fibril Chain: B: peptide 36-31-3-rd;
c6wl0P_ 4.40 protein fibril Chain: P: peptide 36-31-3-rd;
c7aqoA_ 4.50 rna binding protein Chain: A: tho complex subunit 2;
c6wkyL_ 4.20 protein fibril Chain: L: peptide 29-24-3;
c6wl1X_ 4.00 protein fibril Chain: X:
c6wl1J_ 4.00 protein fibril Chain: J: peptide 36-31-3;
c6wl1y_ 4.00 protein fibril Chain: Y:
c6wl1k_ 4.00 protein fibril Chain: K: peptide 36-31-3;
c6wkyN_ 4.20 protein fibril Chain: N: peptide 29-24-3;
c6wl0B_ 4.40 protein fibril Chain: B: peptide 36-31-3-rd;
c6wl0K_ 4.40 protein fibril Chain: K: peptide 36-31-3-rd;
c7ao3A_ 1.45 lyase Chain: A: cyclooctat-9-en-7-ol synthase;
c7a9dA_ 2.70 viral protein Chain: A: hemagglutinin;
c6wkyB_ 4.20 protein fibril Chain: B: peptide 29-24-3;
c6wl1i_ 4.00 protein fibril Chain: I: peptide 36-31-3;
c6wkyt_ 4.20 protein fibril Chain: T: peptide 29-24-3;
c7aftB_ 4.40 membrane protein Chain: B: protein transport protein sbh1;
c6lkgB_ 1.95 transferase/signaling protein Chain: B: sensor protein kinase hpts;
c7d8uB_ 2.70 transferase Chain: B: gtp--rna guanylyltransferase;
c7cafA_ 3.30 transport protein Chain: A: abc sugar transporter, permease component;
c6wl1L_ 4.00 protein fibril Chain: L: peptide 36-31-3;
c6wl1C_ 4.00 protein fibril Chain: C: peptide 36-31-3;
c6wl0o_ 4.40 protein fibril Chain: O: peptide 36-31-3-rd;
c6wkyk_ 4.20 protein fibril Chain: K: peptide 29-24-3;
c6wkyS_ 4.20 protein fibril Chain: S: peptide 29-24-3;
c6wl1b_ 4.00 protein fibril Chain: B: peptide 36-31-3;
c6wkyF_ 4.20 protein fibril Chain: F: peptide 29-24-3;
c6wkyc_ 4.20 protein fibril Chain: C: peptide 29-24-3;
c6wl0R_ 4.40 protein fibril Chain: R: peptide 36-31-3-rd;
c7cagE_ 3.78 transport protein Chain: E: bacterial extracellular solute-binding protein;
c6wl1S_ 4.00 protein fibril Chain: S: peptide 36-31-3;
c6wl1a_ 4.00 protein fibril Chain: A: peptide 36-31-3;
c6wl0X_ 4.40 protein fibril Chain: X:
c6wy6D_ 1.77 protein transport Chain: D: eh domain-containing and endocytosis protein 1;
c6wl0M_ 4.40 protein fibril Chain: M: peptide 36-31-3-rd;
c6wl1q_ 4.00 protein fibril Chain: Q: peptide 36-31-3;
c7aqoE_ 4.50 rna binding protein Chain: E: tex1 isoform 1;
c6wl1H_ 4.00 protein fibril Chain: H: peptide 36-31-3;
c6wl0D_ 4.40 protein fibril Chain: D: peptide 36-31-3-rd;
c6wl0h_ 4.40 protein fibril Chain: H: peptide 36-31-3-rd;
c6wl0O_ 4.40 protein fibril Chain: O: peptide 36-31-3-rd;
c6wl1h_ 4.00 protein fibril Chain: H: peptide 36-31-3;
c6wkyj_ 4.20 protein fibril Chain: J: peptide 29-24-3;
c6wkyr_ 4.20 protein fibril Chain: R: peptide 29-24-3;
c6wl0a_ 4.40 protein fibril Chain: A: peptide 36-31-3-rd;
c6wl1o_ 4.00 protein fibril Chain: O: peptide 36-31-3;
c6wl1T_ 4.00 protein fibril Chain: T: peptide 36-31-3;
c6wkyP_ 4.20 protein fibril Chain: P: peptide 29-24-3;
c7c6oA_ 1.80 ligase Chain: A: cobalamin biosynthesis protein cobn;
c6wl1t_ 4.00 protein fibril Chain: T: peptide 36-31-3;
c6wkyl_ 4.20 protein fibril Chain: L: peptide 29-24-3;
c6wl1Z_ 4.00 protein fibril Chain: Z:
c6wl0T_ 4.40 protein fibril Chain: T: peptide 36-31-3-rd;
c6wl0f_ 4.40 protein fibril Chain: F: peptide 36-31-3-rd;
c6wl0Q_ 4.40 protein fibril Chain: Q: peptide 36-31-3-rd;
c6wl1A_ 4.00 protein fibril Chain: A: peptide 36-31-3;
c7adpD_ 3.60 membrane protein Chain: D: er membrane protein complex subunit 4;
c6wl1f_ 4.00 protein fibril Chain: F: peptide 36-31-3;
c7apxA_ 3.40 rna binding protein Chain: A: tho complex subunit 2,tho2;
c6wl1s_ 4.00 protein fibril Chain: S: peptide 36-31-3;
c6wkyh_ 4.20 protein fibril Chain: H: peptide 29-24-3;
c6wkyp_ 4.20 protein fibril Chain: P: peptide 29-24-3;
c6wkyJ_ 4.20 protein fibril Chain: J: peptide 29-24-3;
c6vptA_ 2.72 lyase Chain: A: cyclase;
c6zxgj_ 2.60 ribosome Chain: J: 40s ribosomal protein s9;
c6wl1V_ 4.00 protein fibril Chain: V:
c6zxgz_ 2.60 ribosome Chain: Z: 40s ribosomal protein s25;
c6v42B_ 1.45 oxidoreductase Chain: B: fad/fmn-containing dehydrogenase;
c6wl0V_ 4.40 protein fibril Chain: V:
c6wkyn_ 4.20 protein fibril Chain: N: peptide 29-24-3;
c6wkyo_ 4.20 protein fibril Chain: O: peptide 29-24-3;
c6wl1O_ 4.00 protein fibril Chain: O: peptide 36-31-3;
c6wkyR_ 4.20 protein fibril Chain: R: peptide 29-24-3;
c6wl0l_ 4.40 protein fibril Chain: L: peptide 36-31-3-rd;
c6wkya_ 4.20 protein fibril Chain: A: peptide 29-24-3;
c6wl0S_ 4.40 protein fibril Chain: S: peptide 36-31-3-rd;
c6wl1D_ 4.00 protein fibril Chain: D: peptide 36-31-3;
c6wl1K_ 4.00 protein fibril Chain: K: peptide 36-31-3;
c6wl1x_ 4.00 protein fibril Chain: X:
c6wl1I_ 4.00 protein fibril Chain: I: peptide 36-31-3;
c6tnjA_ 1.85 cell adhesion Chain: A: minor fimbrium subunit mfa5;
c6wl0e_ 4.40 protein fibril Chain: E: peptide 36-31-3-rd;
c6lf5A_ UNK toxin Chain: A: shspi;
c6wl1R_ 4.00 protein fibril Chain: R: peptide 36-31-3;
c6wl1j_ 4.00 protein fibril Chain: J: peptide 36-31-3;
c6wl0F_ 4.40 protein fibril Chain: F: peptide 36-31-3-rd;
c7adoD_ 3.39 membrane protein Chain: D: er membrane protein complex subunit 4;
c6wl1c_ 4.00 protein fibril Chain: C: peptide 36-31-3;
c6to1A_ 1.80 cell adhesion Chain: A: minor fimbrium subunit mfa5;
c6wl1M_ 4.00 protein fibril Chain: M: peptide 36-31-3;
c6wkyd_ 4.20 protein fibril Chain: D: peptide 29-24-3;
c6le1A_ 2.30 transcription Chain: A: dead end protein homolog 1;
c6wkyK_ 4.20 protein fibril Chain: K: peptide 29-24-3;
c7bvtA_ 1.47 sugar binding protein Chain: A: hypothetical sugar abc-transporter sugar binding protein;
c7d2oA_ UNK luminescent protein Chain: A: luciferase;
c6wl0c_ 4.40 protein fibril Chain: C: peptide 36-31-3-rd;
c6wkyH_ 4.20 protein fibril Chain: H: peptide 29-24-3;
c6wl1F_ 4.00 protein fibril Chain: F: peptide 36-31-3;
c6wl0U_ 4.40 protein fibril Chain: U: peptide 36-31-3-rd;
c6wl1z_ 4.00 protein fibril Chain: Z:
c6wl0i_ 4.40 protein fibril Chain: I: peptide 36-31-3-rd;
c6wkyE_ 4.20 protein fibril Chain: E: peptide 29-24-3;
c6wl0j_ 4.40 protein fibril Chain: J: peptide 36-31-3-rd;
c6wkyM_ 4.20 protein fibril Chain: M: peptide 29-24-3;
c6wl0Z_ 4.40 protein fibril Chain: Z:
c6zxfy_ 3.70 ribosome Chain: Y: 40s ribosomal protein s24;
c6wl1v_ 4.00 protein fibril Chain: V:
c6wl1Y_ 4.00 protein fibril Chain: Y:
c6wl0A_ 4.40 protein fibril Chain: A: peptide 36-31-3-rd;
c6wkyC_ 4.20 protein fibril Chain: C: peptide 29-24-3;
c6wkys_ 4.20 protein fibril Chain: S: peptide 29-24-3;
c6wkyA_ 4.20 protein fibril Chain: A: peptide 29-24-3;
c6wl0H_ 4.40 protein fibril Chain: H: peptide 36-31-3-rd;
c6wkyT_ 4.20 protein fibril Chain: T: peptide 29-24-3;


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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