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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7cagE_

Fold library idPDB HeaderMoleculeTitle
c7cagE_3.78PDB header: transport proteinChain: E: PDB Molecule: bacterial extracellular solute-binding protein;


Added to library: Sat Dec 5 09:10:29 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VINYYTPANEEATFKAVANRCNEQLGGRFQIAQRNLPKGADDQRLQLARRLTGNDKSLDVMALDVVWTAE
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Known secondary structure (DSSP)



B
BTTS
TSS
SS






B
SSSSTT
S



TTSSSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence FAEAGWAVPLSEDPAGLAEADATENTLPGPLETARWQDELYAAPITTNTQLLWYRADLMPAPPTTWDGML
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Known secondary structure (DSSP) TTSSSSB

STTSSSSSTTSS

TTTTTSSBSSSSBS





SSS
SS


B
 .........150.........160.........170.........180.........190.........200.........210
Sequence DEANRLYREGGPSWIAVQGKQYEGMVVWFNTLLQSAGGQVLSDDGQRVTLTDTPEHRAATVKALRIIKSV
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Known secondary structure (DSSP) TTSSSTT

B


STTTTS

SS
SSSS


SSSST
 .........220.........230.........240.........250.........260.........270.........280
Sequence ATAPGADPSITQTDENTARLALEQGKAALEVNWPYVLPSLLENAVKGGVSFLPLDGDPALQGSINDVGTF
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Known secondary structure (DSSP) TS
SS

TTSSS

T

S
TTGGGT

SSS




TTTTT



S


 .........290.........300.........310.........320.........330.........340.........350
Sequence SPTDEQFDIAFDASKKVFGFAPYPGVNPDEPARVTLGGLNLAVASTSQHKAEAFEAIRCLRNVENQRYTS
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Known secondary structure (DSSP)
STTSTTT
S

BSSSS








BSS
S

TTSSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence IEGGLPAVRTSLYDDPAFQKKYPQYEIIRQQLTNAAVRPATPVYQAVSTRMSATLAPISDIDPERTADEL
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Known secondary structure (DSSP) SSSS
B

SSSTTSTTTTTT
TTTTTTTS


S


S

TTTTSS
SS
T
 .........430.....
Sequence TEAVQKAIDGKGLIP
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Known secondary structure (DSSP) T
S



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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