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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7cagC_

Fold library idPDB HeaderMoleculeTitle
c7cagC_3.78PDB header: transport proteinChain: C: PDB Molecule: abc transporter, atp-binding protein sugc;


Added to library: Sat Dec 5 10:16:56 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AEIVLDRVTKSYPAAVKEFSMTIADGEFIILVGPSGCGKSTTLNMIAGLEEITSGELRIGGERVNEKAPK
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Known secondary structure (DSSP)

B














SS

B
STTSSSS
S

SS
B

BSSS

SSS
GG
 .........80.........90.........100.........110.........120.........130.........140
Sequence DRDIAMVFQSYALYPHMTVRQNIAFPLTLAKVPKAEIAAKVEETAKILDLSELLDRKPGQLSGGQRQRVA
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Known secondary structure (DSSP) GS



B
SS



SSS
TGGGTT


TT
SSS
SS
TTSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence MGRAIVRSPKAFLMDQPLSNLDAKLRVQMRAEISRLQDRLGTTTVYVTHDQTEAMTLGDRVVVMLAGEVQ
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Known secondary structure (DSSP) TT

S

SS
SS

S
S




GGGSSSS
SSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence QIGTPDELYSSPANLFVAGFIGSPAMNFFPATRTDVGVRLPFGEVTLTPHMLDLLDKQARPENIIVGIRP
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Known secondary structure (DSSP)


TTTTTSS

TTTSSTT






B

TTT
B
SSS







S




T
 .........290.........300.........310.........320.........330.........340.........350
Sequence EHIEDSALLDGYARIRALTFSVRADIVESLGADKYVHFTTNQFIARVSADSRVRTGEQIELAIDTTKLSI
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Known secondary structure (DSSP) TT
SSS
BS
S









TT



TTS


SSS




TT



 .........360..
Sequence FDAATGLNLTRD
Predicted secondary structure


SS confidence











Known secondary structure (DSSP) TTT







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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