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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7c6oA_

Fold library idPDB HeaderMoleculeTitle
c7c6oA_1.80PDB header: ligaseChain: A: PDB Molecule: cobalamin biosynthesis protein cobn;


Added to library: Sat Dec 5 09:02:53 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PEPTVLLLSTSDTDLISARSSGKNYRWANPSRLSDLELTDLLAEASIVVIRILGGYRAWQSGIDTVIAGG
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Known secondary structure (DSSP)

S
S

SS
GGG

TT
SSS
GGGGTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence VPAVLVSGEQAADAELTDRSTVAAGTALQAHIYLAHGGVDNLRELHAFLCDTVLMTGFGFTPPVATPTWG
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Known secondary structure (DSSP) S
SSSS

SSS

ST












S
 .........150.........160.........170.........180.........190.........200.........210
Sequence VLERPDAGKTGPTIAVLYYRAQHLAGNTGYVEALCRAIEDAGGRPLPLYCASLRTAEPRLLERLGGADAM
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Known secondary structure (DSSP)








S
T

TT
S
STT

TT
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence VVTVLAAGGVKPAAASAGGDDDSWNVEHLAALDIPILQGLCLTSPRDQWCANDDGLSPLDVASQVAVPEF
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Known secondary structure (DSSP)
S

SS
S
GGGSSTTS
GGGS

TT
S
SS

S

S
TTTGGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence DGRIITVPFSFKEIDDDGLISYVADPERCARVAGLAVRHARLRQVAPADKRVALVFSAYRIGNAVGLDTP
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Known secondary structure (DSSP) GT

TTS

S
GGG









TTB
 .........360.........370.........380.........390.........400.........410.........420
Sequence ASAVALLQAMRQRGYRVGDLPGVESNDGDALIHALIECGGHNPIRVSAKEYRDWFATLPAELTDVVTAYW
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Known secondary structure (DSSP) T


TT
TTTTTT




TTS
 .........430.........440.........450.........460.........470.........480.........490
Sequence GPPPGELFVDRSHDPDGEIVIAALRAGNLVLMVQPPRGFGENPVAIYHDPDLPPSHHYLAAYRWLDTGFS
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Known secondary structure (DSSP)
STT
SSS
SS
TT


TT



STTT

TT



SS
ST
 .........500.........510.........520.........530.........540.........550.........560
Sequence NGFGAHAVVHLGKHGNLEWLPGKTLGMSASCGPDAALGDLPLIYPFLVNDPGEGTQAKRRAHAVLVDHLI
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Known secondary structure (DSSP) T



SSS

SGGGSSS
SSS

TTSTT

TT
S



 .........570.........580.........590.........600.........610.........620.........630
Sequence PPMARAETYGDIARLEQLLDEHASVAALDPGKLPAIRQQIWTLIRAAKMDHDLGLTERPEEDSFDDMLLH
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Known secondary structure (DSSP)






GGGTTTT
SS


 .........640.........650.........660.........670.........680.........690.........700
Sequence VDGWLCEIKDVQIRDGLHILGQNPTGEQELDLVLAILRARQLFGGAHAIPGLRQALGLAEDGTDERATVD
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Known secondary structure (DSSP) S
S
B
TT



S


BTTB

S

TT


SS


 .........710.........720.........730.........740.........750.........760.........770
Sequence QTEAKARELVAALQATGWDPSAADRLTGNADAAAVLRFAATEVIPRLAGTATEIEQVLRALDGRFIPAGP
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Known secondary structure (DSSP) TTS
TT
S
TGGGGGTT






 .........780.........790.........800.........810.........820.........830.........840
Sequence SGSPLRGLVNVLPTGRNFYSVDPKAVPSRLAWEAGVALADSLLARYRDEHGRWPRSVGLSVWGTSAMRTA
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Known secondary structure (DSSP)
S
TTTT
GGG
S
SS





TTS
S
SS

S
S
 .........850.........860.........870.........880.........890.........900.........910
Sequence GDDIAEVLALLGVRPVWDDASRRVIDLAPMQPAELGRPRIDVTVRISGFFRDAFPHVVTMLDDAVRLVAD
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Known secondary structure (DSSP) ST
TTT




S
B


T
 .........920.........930.........940.........950.........960.........970.........980
Sequence LDEAAEDNYVRAHAQADLAHHGDQRRATTRIFGSKPGTYGAGLLQLIDSRSWRDDADLAQVYTAWGGFAY
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Known secondary structure (DSSP) S


GGGB

T

S
TT



ST


S
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence GRDLDGREAIDDMNRQYRRIAVAAKNTDTREHDIADSDDYFQYHGGMVATVRALTGQAPAAYIGDNTRPD
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Known secondary structure (DSSP) STTTTT
TT
S

SSS
TTT
SS


SSTT
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence AIRTRTLSEETTRVFRARVVNPRWMAAMRRHGYKGAFEMAATVDYLFGYDATAGVMADWMYEQLTQRYVL
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Known secondary structure (DSSP) S
TTT
TTS



TT
 .........1130.........1140.........1150.........1160.........1170...
Sequence DAQNRTFMTESNPWALHGMAERLLEAAGRGLWAQPAPETLDGLRQVLLETEGD
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Known secondary structure (DSSP) S
TSS
S



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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