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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6lklB_

Fold library idPDB HeaderMoleculeTitle
c6lklB_2.21PDB header: signaling proteinChain: B: PDB Molecule: abc transporter, solute-binding protein;


Added to library: Sat Dec 5 08:56:05 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NVLTVYSPYQSNLIRPILNEFEKQEHVKIEIKHGSTQVLLSNLHNEDFSERGDVFMGGVLSETIDHPEDF
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Known secondary structure (DSSP)


S
T

S
TS
GGG

SSS

S
GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence VPYQDTSVTQQLEDYRSNNKYVTSFLLMPTVIVVNSDLQGDIKIRGYQDLLQPILKGKIAYSNPNTTTTG
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Known secondary structure (DSSP)



GGGGGB
GGGS

STT
TT


SSTTGGGSGGGTTS
TTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence YQHMRAIYSMHHRVSDVHQFQNHAMQLSKTSKVIEDVAKGKYYAGLSYEQDARTWKNKGYPVSIVYPIEG
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Known secondary structure (DSSP) T
TTSS
TTS
STT



SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence TMLNVDGIALVKNAHPHPKRKKLVQYLTSRSVQQRLVAEFDAKSIRKDVSEQSDQSIENLKNIPLIPKSK
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Known secondary structure (DSSP) B


SS

TTTSSS
SBTTS




SS


GGGS
B

GGG
 .........290....
Sequence LPDIPHHKFLEMIQ
Predicted secondary structure





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Known secondary structure (DSSP) S





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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