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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7cafA_

Fold library idPDB HeaderMoleculeTitle
c7cafA_3.30PDB header: transport proteinChain: A: PDB Molecule: abc sugar transporter, permease component;


Added to library: Sat Dec 5 10:30:00 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KKSERRLAFWLIAPAVLLMLAVTAYPIGYAVWLSLQRYNLAEPHDTEFIGLANYVTVLTDGYWWTAFAVT
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Known secondary structure (DSSP)

SSTB

BSS
TT


B
SSTTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence LGITVVSVAIEFALGLALALVMHRTIFGKGAVRTAILIPYGIVTVAASYSWYYAWTPGTGYLANLLPEGS
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Known secondary structure (DSSP) S
SS
TTS
TSTTT
TTTSSS
SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence APLTDQLPSLAIVVLAEVWKTTPFMALLLLAGLALVPQDLLNAAQVDGAGPWKRLTKVILPMIKPAILVA
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Known secondary structure (DSSP)
TTSSTTS
TT

TTTSTTTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence LLFRTLDAFRIFDNIYILTGGSNDTGSVSILGYDNLFKAFNVGLGSAISVLIFLSVAIIAFIYIKIFGAA
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Known secondary structure (DSSP) T

TTTTTGGG


TS
BSS


 ....
Sequence APGS
Predicted secondary structure



SS confidence



Known secondary structure (DSSP)
TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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