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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6ysnD_

Fold library idPDB HeaderMoleculeTitle
c6ysnD_3.00PDB header: membrane proteinChain: D: PDB Molecule: maltose/maltodextrin-binding periplasmic protein,short


Added to library: Sat Dec 5 09:03:34 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RIPLQIVRAETELSAEEKAFVNINCMDPLGRSALLIAIENENLYVGDALLYAIRKEVVGAVELLLSQFSE
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Known secondary structure (DSSP)





SS





SGGG



S



TT


TT



TTTT
SSSTT



S
 .........80.........90.........100.........110.........120.........130.........140
Sequence FTPDITPIMLAAHTNNYEIIKLLVQKRVTIPRPHQIRCNCVECVSSSEVDSLRHSRSRLNIYKALASPSL
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Known secondary structure (DSSP) S
TT

T
SS








TT

SSTTTTSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence IALSSEDPILTAFRLGWELKELSKVENEFKAEYEELSQQCKLFAKDLLDQARSSRELEIILNHRDLAKLK
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Known secondary structure (DSSP) SS
S
TSSSSTGGG

SSTTTT



TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence VAIKYHQKEFVAQPNCQQLLATLWYDGFPGWRRKHWVVKLLTCMTIGFLFPMLSIAYLISPRSNLGLFIK
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Known secondary structure (DSSP) TT
TTTTT
STT
TTTTSS
TTTTTS
TTSTGGGTTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence KPFIKFICHTASYLTFLFMLLLASQDLHVQGPPPTVVEWMILPWVLGFIWGEIKEMWDGGYIHDWWNLMD
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Known secondary structure (DSSP) STTTTTTTT




SS



TTTTS


TTST
 .........360.........370.........380.........390.........400.........410.........420
Sequence FAMNSLYLATISLKIMAYVKYNGSRPREEWEMWHPTLIAEALFAISNILSSLRLISLFTANSHLGPLQIS
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Known secondary structure (DSSP) TTTTSS

S


GGG

TT
GGGGGGGTTSTTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence LGRMLLDILKFLFIYCLVLLAFANGLNQLYFYYETRAIDEPNNCKGIRCEKQNNAFSTLFETLQSLFWSV
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Known secondary structure (DSSP) SSSSTTTTTTTTGGG


SSSSGGG

SSSSSS


SSSSTT
 .........500.........510.........520.........530.........540.........550.........560
Sequence FGLLNLYVTNVKARHEFTEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMS
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Known secondary structure (DSSP) TT
S
GGGG

SS

TTTTTTTTST
 .........570.........580.........590.........600......
Sequence YFDEGGTLPPPFNIINADSLIQNQHYQEVIRNLVKRYVAAMIRNSK
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Known secondary structure (DSSP) TSSSTT
S
T


T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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