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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7aqoH_

Fold library idPDB HeaderMoleculeTitle
c7aqoH_4.50PDB header: rna binding proteinChain: H: PDB Molecule: tho complex subunit hpr1;


Added to library: Sat Dec 5 08:47:28 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SNTEELIQNSIGFLQKTFKALPVSFDSIRHEPLPSSMLHASVLNFEWEPLEKNISAIHDRDSLIDIILKR
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Known secondary structure (DSSP)




S


GGGS
TTTGGG

S



TTGGGSSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence FIIDSMTLEKGLLNSCIGLDFVYNSRFNRSNPASWGNTFFELFSTIIDLLNSPSTFLKFWPYAESRIEWF
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STTTTSSSGGG

SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence KMNTSVEPVSLGESNLISYKQPLYEKLRHWNDILAKLENNDILNTVKHYNMKYKLENFLSELLPINEESN
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Known secondary structure (DSSP) S
SS
SS


TT




TTSTT
SS

S
TTSTTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence FNRSASISALQESDNEWNRSSSDVIFAADYNFVFYHLIICPIEFAFSDLEYKNDVDRSLSPLLDAILEIE
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Known secondary structure (DSSP) S

S







S
TTSS


T
TTGGGS

SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence ENFYSKIKMNNRTRYSLEEALNTEYYANYDVMTPKLPVYMKHSNAMKMDRNEFWANLQNIKESDDYTLRP
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Known secondary structure (DSSP) TSSS



SS






T
STSTT




 .........360.........370.........380.........390.........400.........410.........420
Sequence TIMDISLSNTTCLYKQLTQEDDDYYRKQFILQLCFTTNLIRNLISSDETRNFYKSCYLRENPLSDIDFEN
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Known secondary structure (DSSP)
TT


SSSS
SS

SS
S




SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence LDEVNKKRGLNLCSYICDNRVLKFYKIKDPDFYRVIRKLMSSDEKFTTAKIDGFKEFQNFRISKEKIPPP
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STTTTTTTS
TTTTSGGGT











 .........500.........510.........520.........530.........540.........550.........560
Sequence AFDETFKKFTFIKMGNKLINNVWKIPTGLDKIEQEVKKPEGVYEIIRQWQTLRFLRSRYLFDFDKVNEKT
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Known secondary structure (DSSP)









S
SSSSTSS


TTTS





S





TTTSTTTTTT
TTSS
 ...
Sequence GVD
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SS confidence


Known secondary structure (DSSP)



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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