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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6xe9A_

Fold library idPDB HeaderMoleculeTitle
c6xe9A_4.30PDB header: contractile proteinChain: A: PDB Molecule: myosin ii heavy chain (smooth muscle);


Added to library: Sat Dec 5 12:09:15 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LAQADWSAKKLVWVPSEKHGFEAASIKEEKGDEVTVELQENGKKVTLSKDDIQKMNPPKFSKVEDMAELT
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Known secondary structure (DSSP)
STT
SSSSTT
TTT

B

B
SS






GGGTT
SBGGG
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence CLNEASVLHNLRERYFSGLIYTYSGLFCVVVNPYKQLPIYSEKIIDMYKGKKRHEMPPHIYAIADTAYRS
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Known secondary structure (DSSP) S

TT


TT


SS

S


SSS
STTS


 .........150.........160.........170.........180.........190.........200.........210
Sequence MLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKQGPSFSYGELEKQLLQANPILEAFGNAKT
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Known secondary structure (DSSP) SS


SS
TTTTS


S



S
S


TSS



 .........220.........230.........240.........250.........260.........270.........280
Sequence VKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEG
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Known secondary structure (DSSP) SS
SSS
SS

TTS




S

TT



TTS
TT


 .........290.........300.........310.........320.........330.........340.........350
Sequence FNNYTFLSNGHVPIPAQQDDEMFQETLEAMRIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMP
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Known secondary structure (DSSP) SSS
TT
TT




TT

T

GGG





TTT
B


S
 .........360.........370.........380.........390.........400.........410.........420
Sequence DNTAAQKVCHLMGINVTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWILTRVNKA
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Known secondary structure (DSSP)
TTS
S
TT


BTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence LDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDFGL
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Known secondary structure (DSSP)
SSS



SS







SS

TT
S







 .........500.........510.........520.........530.........540.........550.........560
Sequence DLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQEQGNHPKFQKSKQLKDKTEFCILHYAGK
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Known secondary structure (DSSP)



SSS

TSSS

TSS
TT

SS
GGGTTT
 .........570.........580.........590.........600.........610.........620.........630
Sequence VSYNASAWLTKNMDPLNDNVTSLLNQSSDKFVADLWKDVDRIVGLFRTVGQLYKEQLTKLMTTLRNTNPN
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Known secondary structure (DSSP)
TT



T
SSTS

SS






TSB

 .........640.........650.........660.........670.........680.........690.........700
Sequence FVRCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANAIPKGFMDGK
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Known secondary structure (DSSP)

S
TT

SS


STTS



TTS

SS

SS


 .........710.........720.........730.........740.........750.........760.........770
Sequence QACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDVIIAFQAQCRGYLARKAFAKRQQQLT
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Known secondary structure (DSSP) T

GGG

SS
SS
 .........780.........790.........800.........810.........820.........830.........840
Sequence AMKVIQRNCAAYLKLRNWQWWRLFTKVKPLLQVTRQEEEMQAKDEELQRTKERQQKAEAELKELEQKHTQ
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Known secondary structure (DSSP) TT
TTT

 .........850.........860.........870.........880.........890.........900.........910
Sequence LCEEKNLLQEKLQAETELYAEAEEMRVRLAAKKQELEEILHEMEARIEEEEERSQQLQAEKKKMEEGKKK
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Known secondary structure (DSSP)



 .........920.........930.........940.........950.........960.........970.........980
Sequence FQREIESLTQQFEEKAASYDKLEKTKNRLQQELDDLVVDLDNQRQLVSNLEKKQKKFDQMLAEEKNISSK
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Known secondary structure (DSSP)
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence YADERDRAEAEAREKETKALSLARALEEALEAKEELERTNKMLKAEMEDLVSSKDDVGKNVHELEKSKRT
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Known secondary structure (DSSP) SS
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence LEQQVEEMKTQLEELEDELQAAEDAKLRLEVNMQAMKSQFERDLQARDEQNEEKRRQLLKQLHEHETELE
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Known secondary structure (DSSP)
 .........1130.........1140.........1150.........1160.........1170.........1180...
Sequence DERKQRALAAAAKKKLEVDVKDLESQVDSVNKAREEAIKQLRKLQAQMKDYQRDLDDARAARE
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Known secondary structure (DSSP) TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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