Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionO05154
DateTue Jul 17 17:05:01 BST 2012
Unique Job IDacbb5c26848b3b4f

Summary 

Top model
Image coloured by rainbow N → C terminus
Model (left) based on template c2z86D_
Top template information
PDB header:transferase
Chain: D: PDB Molecule:chondroitin synthase;
PDBTitle: crystal structure of chondroitin polymerase from2 escherichia coli strain k4 (k4cp) complexed with udp-glcua3 and udp
Confidence and coverage
Confidence:100.0% Coverage: 57%
201 residues ( 57% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MRFTIIIPTCNNEATIRQLLISIESKEHYRILCIDGGSTDQTIPMIERLQRELKHISLIQ
Secondary structure 
SS confidence 
Disorder  ??
Disorder confidence 
 
   .........70.........80.........90.........100.........110.........120
Sequence  LQNASIATCINKGLMDIKMTDPHDSDAFMVIKPTSIVLPGKLDRLTAAFKNNDNIDMVIG
Secondary structure 
SS confidence 
Disorder 
?
????
Disorder confidence 
 
   .........130.........140.........150.........160.........170.........180
Sequence  QRAYNYHGEWKLKSADEFIKDNRIVTLTEQPDLLSMMSFDGKLFSAKFAELQCDETLANT
Secondary structure 
SS confidence 
Disorder 
??
???
Disorder confidence 
 
   .........190.........200.........210.........220.........230.........240
Sequence  YNHAILVKAMQKATDIHLVSQMIVGDNDIDTHATSNDEDFNRYITEIMKIRQRVMEMLLL
Secondary structure 
SS confidence 
Disorder 
???????
Disorder confidence 
 
   .........250.........260.........270.........280.........290.........300
Sequence  PEQRLLYSDMVDRILFNNSLKYYMNEHPAVTHTTIQLVKDYIMSMQHSDYVSQNMFDIIN
Secondary structure 
SS confidence 
Disorder 
?
?
?
Disorder confidence 
 
   .........310.........320.........330.........340.........350...
Sequence  TVEFIGENWDREIYELWRQTLIQVGINRPTYKKFLIQLKGRKFAHRTKSMLKR
Secondary structure 
SS confidence 
Disorder 
?
??
???
Disorder confidence 
 

Confidence Key
High(9)                    Low (0)
?Disordered
Alpha helix
Beta strand

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 2z86 chain D

3D model

Region: 2 - 215
Aligned: 201
Modelled: 202
Confidence: 100.0%
Identity: 13%
PDB header:transferase
Chain: D: PDB Molecule:chondroitin synthase;
PDBTitle: crystal structure of chondroitin polymerase from2 escherichia coli strain k4 (k4cp) complexed with udp-glcua3 and udp

Phyre2

PDB 1xhb chain A domain 2

3D model

Region: 2 - 233
Aligned: 225
Modelled: 232
Confidence: 100.0%
Identity: 15%
Fold: Nucleotide-diphospho-sugar transferases
Superfamily: Nucleotide-diphospho-sugar transferases
Family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain

Phyre2

PDB 2d7i chain A

3D model

Region: 2 - 239
Aligned: 230
Modelled: 238
Confidence: 100.0%
Identity: 15%
PDB header:transferase
Chain: A: PDB Molecule:polypeptide n-acetylgalactosaminyltransferase 10;
PDBTitle: crsytal structure of pp-galnac-t10 with udp, galnac and mn2+

Phyre2

PDB 2ffu chain A

3D model

Region: 2 - 249
Aligned: 235
Modelled: 242
Confidence: 100.0%
Identity: 13%
PDB header:transferase
Chain: A: PDB Molecule:polypeptide n-acetylgalactosaminyltransferase 2;
PDBTitle: crystal structure of human ppgalnact-2 complexed with udp2 and ea2

Phyre2

PDB 1xhb chain A

3D model

Region: 3 - 233
Aligned: 224
Modelled: 231
Confidence: 100.0%
Identity: 17%
PDB header:transferase
Chain: A: PDB Molecule:polypeptide n-acetylgalactosaminyltransferase 1;
PDBTitle: the crystal structure of udp-galnac: polypeptide alpha-n-2 acetylgalactosaminyltransferase-t1

Phyre2

PDB 1qg8 chain A

3D model

Region: 2 - 229
Aligned: 213
Modelled: 227
Confidence: 100.0%
Identity: 9%
Fold: Nucleotide-diphospho-sugar transferases
Superfamily: Nucleotide-diphospho-sugar transferases
Family: Spore coat polysaccharide biosynthesis protein SpsA

Phyre2

PDB 3f1y chain C

3D model

Region: 2 - 234
Aligned: 223
Modelled: 233
Confidence: 100.0%
Identity: 9%
PDB header:transferase
Chain: C: PDB Molecule:mannosyl-3-phosphoglycerate synthase;
PDBTitle: mannosyl-3-phosphoglycerate synthase from rubrobacter xylanophilus

Phyre2

PDB 3bcv chain A

3D model

Region: 2 - 200
Aligned: 187
Modelled: 198
Confidence: 99.9%
Identity: 16%
PDB header:transferase
Chain: A: PDB Molecule:putative glycosyltransferase protein;
PDBTitle: crystal structure of a putative glycosyltransferase from bacteroides2 fragilis

Phyre2

PDB 1omx chain B

3D model

Region: 2 - 168
Aligned: 156
Modelled: 167
Confidence: 99.9%
Identity: 12%
PDB header:transferase
Chain: B: PDB Molecule:alpha-1,4-n-acetylhexosaminyltransferase extl2;
PDBTitle: crystal structure of mouse alpha-1,4-n-2 acetylhexosaminyltransferase (extl2)

Phyre2

PDB 1omz chain A

3D model

Region: 2 - 134
Aligned: 126
Modelled: 133
Confidence: 99.9%
Identity: 12%
Fold: Nucleotide-diphospho-sugar transferases
Superfamily: Nucleotide-diphospho-sugar transferases
Family: Exostosin

Phyre2

PDB 4fix chain A

3D model

Region: 2 - 283
Aligned: 270
Modelled: 282
Confidence: 99.9%
Identity: 12%
PDB header:transferase
Chain: A: PDB Molecule:udp-galactofuranosyl transferase glft2;
PDBTitle: crystal structure of glft2

Phyre2

PDB 3ckv chain A

3D model

Region: 2 - 229
Aligned: 213
Modelled: 228
Confidence: 99.9%
Identity: 11%
PDB header:unknown function
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of a mycobacterial protein

Phyre2

PDB 2qgi chain A

3D model

Region: 7 - 212
Aligned: 194
Modelled: 200
Confidence: 99.9%
Identity: 11%
PDB header:transferase
Chain: A: PDB Molecule:atp synthase subunits region orf 6;
PDBTitle: the udp complex structure of the sixth gene product of the f1-atpase2 operon of rhodobacter blasticus

Phyre2

PDB 2bo4 chain A domain 1

3D model

Region: 4 - 205
Aligned: 190
Modelled: 202
Confidence: 99.0%
Identity: 11%
Fold: Nucleotide-diphospho-sugar transferases
Superfamily: Nucleotide-diphospho-sugar transferases
Family: MGS-like

Phyre2

PDB 1pzt chain A

3D model

Region: 2 - 208
Aligned: 156
Modelled: 158
Confidence: 98.3%
Identity: 16%
Fold: Nucleotide-diphospho-sugar transferases
Superfamily: Nucleotide-diphospho-sugar transferases
Family: beta 1,4 galactosyltransferase (b4GalT1)

Phyre2

PDB 1fo8 chain A

3D model

Region: 1 - 120
Aligned: 119
Modelled: 120
Confidence: 98.0%
Identity: 16%
Fold: Nucleotide-diphospho-sugar transferases
Superfamily: Nucleotide-diphospho-sugar transferases
Family: N-acetylglucosaminyltransferase I

Phyre2

PDB 2wvm chain A

3D model

Region: 2 - 109
Aligned: 104
Modelled: 108
Confidence: 97.5%
Identity: 13%
PDB header:transferase
Chain: A: PDB Molecule:mannosyl-3-phosphoglycerate synthase;
PDBTitle: h309a mutant of mannosyl-3-phosphoglycerate synthase from2 thermus thermophilus hb27 in complex with3 gdp-alpha-d-mannose and mg(ii)

Phyre2

PDB 2zu8 chain A

3D model

Region: 2 - 109
Aligned: 103
Modelled: 106
Confidence: 97.3%
Identity: 12%
PDB header:transferase
Chain: A: PDB Molecule:mannosyl-3-phosphoglycerate synthase;
PDBTitle: crystal structure of mannosyl-3-phosphoglycerate synthase2 from pyrococcus horikoshii

Phyre2

PDB 3lw6 chain A

3D model

Region: 2 - 196
Aligned: 140
Modelled: 144
Confidence: 97.2%
Identity: 15%
PDB header:transferase
Chain: A: PDB Molecule:beta-4-galactosyltransferase 7;
PDBTitle: crystal structure of drosophila beta1,4-galactosyltransferase-7

Phyre2

PDB 2px7 chain A

3D model

Region: 1 - 119
Aligned: 101
Modelled: 107
Confidence: 97.0%
Identity: 14%
PDB header:transferase
Chain: A: PDB Molecule:2-c-methyl-d-erythritol 4-phosphate
PDBTitle: crystal structure of 2-c-methyl-d-erythritol 4-phosphate2 cytidylyltransferase from thermus thermophilus hb8

Phyre2
1
c2z86D_
2
d1xhba2
3
c2d7iA_
4
c2ffuA_
5
c1xhbA_
6
d1qg8a_
7
c3f1yC_
8
c3bcvA_
9
c1omxB_
10
d1omza_
11
c4fixA_
12
c3ckvA_
13
c2qgiA_
14
d2bo4a1
15
d1pzta_
16
d1fo8a_
17
c2wvmA_
18
c2zu8A_
19
c3lw6A_
20
c2px7A_
21
22
23
24
25
26
27
28
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Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2z86D_
100.0 13 PDB header:transferase
Chain: D: PDB Molecule:chondroitin synthase;
PDBTitle: crystal structure of chondroitin polymerase from2 escherichia coli strain k4 (k4cp) complexed with udp-glcua3 and udp
2d1xhba2
100.0 15 Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
3c2d7iA_
100.0 15 PDB header:transferase
Chain: A: PDB Molecule:polypeptide n-acetylgalactosaminyltransferase 10;
PDBTitle: crsytal structure of pp-galnac-t10 with udp, galnac and mn2+
4c2ffuA_
100.0 13 PDB header:transferase
Chain: A: PDB Molecule:polypeptide n-acetylgalactosaminyltransferase 2;
PDBTitle: crystal structure of human ppgalnact-2 complexed with udp2 and ea2
5c1xhbA_
100.0 17 PDB header:transferase
Chain: A: PDB Molecule:polypeptide n-acetylgalactosaminyltransferase 1;
PDBTitle: the crystal structure of udp-galnac: polypeptide alpha-n-2 acetylgalactosaminyltransferase-t1
6d1qg8a_
100.0 9 Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:Spore coat polysaccharide biosynthesis protein SpsA
7c3f1yC_
100.0 9 PDB header:transferase
Chain: C: PDB Molecule:mannosyl-3-phosphoglycerate synthase;
PDBTitle: mannosyl-3-phosphoglycerate synthase from rubrobacter xylanophilus
8c3bcvA_
99.9 16 PDB header:transferase
Chain: A: PDB Molecule:putative glycosyltransferase protein;
PDBTitle: crystal structure of a putative glycosyltransferase from bacteroides2 fragilis
9c1omxB_
99.9 12 PDB header:transferase
Chain: B: PDB Molecule:alpha-1,4-n-acetylhexosaminyltransferase extl2;
PDBTitle: crystal structure of mouse alpha-1,4-n-2 acetylhexosaminyltransferase (extl2)
10d1omza_
99.9 12 Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:Exostosin
11c4fixA_
99.9 12 PDB header:transferase
Chain: A: PDB Molecule:udp-galactofuranosyl transferase glft2;
PDBTitle: crystal structure of glft2
12c3ckvA_
99.9 11 PDB header:unknown function
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of a mycobacterial protein
13c2qgiA_
99.9 11 PDB header:transferase
Chain: A: PDB Molecule:atp synthase subunits region orf 6;
PDBTitle: the udp complex structure of the sixth gene product of the f1-atpase2 operon of rhodobacter blasticus
14d2bo4a1
99.0 11 Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:MGS-like
15d1pzta_
98.3 16 Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:beta 1,4 galactosyltransferase (b4GalT1)
16d1fo8a_
98.0 16 Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:N-acetylglucosaminyltransferase I
17c2wvmA_
97.5 13 PDB header:transferase
Chain: A: PDB Molecule:mannosyl-3-phosphoglycerate synthase;
PDBTitle: h309a mutant of mannosyl-3-phosphoglycerate synthase from2 thermus thermophilus hb27 in complex with3 gdp-alpha-d-mannose and mg(ii)
18c2zu8A_
97.3 12 PDB header:transferase
Chain: A: PDB Molecule:mannosyl-3-phosphoglycerate synthase;
PDBTitle: crystal structure of mannosyl-3-phosphoglycerate synthase2 from pyrococcus horikoshii
19c3lw6A_
97.2 15 PDB header:transferase
Chain: A: PDB Molecule:beta-4-galactosyltransferase 7;
PDBTitle: crystal structure of drosophila beta1,4-galactosyltransferase-7
20c2px7A_
97.0 14 PDB header:transferase
Chain: A: PDB Molecule:2-c-methyl-d-erythritol 4-phosphate
PDBTitle: crystal structure of 2-c-methyl-d-erythritol 4-phosphate2 cytidylyltransferase from thermus thermophilus hb8
21d3cu0a1
not modelled 96.4 17 Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:1,3-glucuronyltransferase
22d1i52a_
not modelled 96.1 13 Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:Cytidylytransferase
23c2d0jD_
not modelled 95.6 12 PDB header:transferase
Chain: D: PDB Molecule:galactosylgalactosylxylosylprotein 3-beta-
PDBTitle: crystal structure of human glcat-s apo form
24c3oamD_
not modelled 94.6 11 PDB header:transferase
Chain: D: PDB Molecule:3-deoxy-manno-octulosonate cytidylyltransferase;
PDBTitle: crystal structure of cytidylyltransferase from vibrio cholerae
25d1fxoa_
not modelled 94.3 10 Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:glucose-1-phosphate thymidylyltransferase
26d1v82a_
not modelled 94.1 11 Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:1,3-glucuronyltransferase
27c3okrA_
not modelled 94.0 10 PDB header:transferase
Chain: A: PDB Molecule:2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase;
PDBTitle: structure of mtb apo 2-c-methyl-d-erythritol 4-phosphate2 cytidyltransferase (ispd)
28d1w55a1
not modelled 93.9 18 Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:Cytidylytransferase
29d1w77a1
not modelled 93.8 7 Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:Cytidylytransferase
30c2wawA_
not modelled 93.6 7 PDB header:unknown function
Chain: A: PDB Molecule:moba relate protein;
PDBTitle: crystal structure of mycobacterium tuberculosis rv0371c2 homolog from mycobacterium sp. strain jc1
31d1lvwa_
not modelled 92.6 9 Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:glucose-1-phosphate thymidylyltransferase
32d1vgwa_
not modelled 91.6 11 Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:Cytidylytransferase
33d1h5ra_
not modelled 91.4 17 Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:glucose-1-phosphate thymidylyltransferase
34d1iina_
not modelled 91.0 11 Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:glucose-1-phosphate thymidylyltransferase
35c2gamA_
not modelled 90.5 8 PDB header:transferase
Chain: A: PDB Molecule:beta-1,6-n-acetylglucosaminyltransferase;
PDBTitle: x-ray crystal structure of murine leukocyte-type core 2 b1,2 6-n-acetylglucosaminyltransferase (c2gnt-l) in complex3 with galb1,3galnac
36d1vh3a_
not modelled 90.3 10 Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:Cytidylytransferase
37c2xwlB_
not modelled 90.0 12 PDB header:transferase
Chain: B: PDB Molecule:2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase;
PDBTitle: crystal structure of ispd from mycobacterium smegmatis in complex2 with ctp and mg
38c1jylC_
not modelled 89.7 17 PDB header:transferase
Chain: C: PDB Molecule:ctp:phosphocholine cytidylytransferase;
PDBTitle: catalytic mechanism of ctp:phosphocholine2 cytidylytransferase from streptococcus pneumoniae (licc)
39d1mc3a_
not modelled 89.4 7 Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:glucose-1-phosphate thymidylyltransferase
40c2e8bA_
not modelled 87.3 8 PDB header:biosynthetic protein
Chain: A: PDB Molecule:probable molybdopterin-guanine dinucleotide biosynthesis
PDBTitle: crystal structure of the putative protein (aq1419) from aquifex2 aeolicus vf5
41c2vshB_
not modelled 87.0 11 PDB header:transferase
Chain: B: PDB Molecule:2-c-methyl-d-erythritol 4-phosphate
PDBTitle: synthesis of cdp-activated ribitol for teichoic acid2 precursors in streptococcus pneumoniae
42c3d5nB_
not modelled 86.3 21 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:q97w15_sulso;
PDBTitle: crystal structure of the q97w15_sulso protein from2 sulfolobus solfataricus. nesg target ssr125.
43d1h7ea_
not modelled 85.2 10 Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:Cytidylytransferase
44c1w57A_
not modelled 81.5 18 PDB header:transferase
Chain: A: PDB Molecule:ispd/ispf bifunctional enzyme;
PDBTitle: structure of the bifunctional ispdf from campylobacter2 jejuni containing zn
45c3ngwA_
not modelled 80.8 11 PDB header:biosynthetic protein
Chain: A: PDB Molecule:molybdopterin-guanine dinucleotide biosynthesis protein a
PDBTitle: crystal structure of molybdopterin-guanine dinucleotide biosynthesis2 protein a from archaeoglobus fulgidus, northeast structural genomics3 consortium target gr189
46c3brcA_
not modelled 79.8 10 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:conserved protein of unknown function;
PDBTitle: crystal structure of a conserved protein of unknown function from2 methanobacterium thermoautotrophicum
47c3polA_
not modelled 79.4 11 PDB header:transferase
Chain: A: PDB Molecule:3-deoxy-manno-octulosonate cytidylyltransferase;
PDBTitle: 2.3 angstrom crystal structure of 3-deoxy-manno-octulosonate2 cytidylyltransferase (kdsb) from acinetobacter baumannii.
48c3okrC_
not modelled 77.8 13 PDB header:transferase
Chain: C: PDB Molecule:2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase;
PDBTitle: structure of mtb apo 2-c-methyl-d-erythritol 4-phosphate2 cytidyltransferase (ispd)
49d1vpaa_
not modelled 77.3 7 Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:Cytidylytransferase
50d1eyra_
not modelled 76.4 13 Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:Cytidylytransferase
51c2we9A_
not modelled 73.7 9 PDB header:unknown function
Chain: A: PDB Molecule:moba-related protein;
PDBTitle: crystal structure of rv0371c from mycobacterium2 tuberculosis h37rv
52d1vica_
not modelled 73.0 8 Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:Cytidylytransferase
53d1jyka_
not modelled 71.9 18 Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:Cytidylytransferase
54d2czwa1
not modelled 68.4 7 Fold:Bacillus chorismate mutase-like
Superfamily:L30e-like
Family:L30e/L7ae ribosomal proteins
55d1rlga_
not modelled 68.1 11 Fold:Bacillus chorismate mutase-like
Superfamily:L30e-like
Family:L30e/L7ae ribosomal proteins
56d2oi6a2
not modelled 67.6 9 Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:UDP-glucose pyrophosphorylase
57d1jj2f_
not modelled 67.0 12 Fold:Bacillus chorismate mutase-like
Superfamily:L30e-like
Family:L30e/L7ae ribosomal proteins
58d2aifa1
not modelled 66.1 6 Fold:Bacillus chorismate mutase-like
Superfamily:L30e-like
Family:L30e/L7ae ribosomal proteins
59c3ktsA_
not modelled 65.8 14 PDB header:transcriptional regulator
Chain: A: PDB Molecule:glycerol uptake operon antiterminator regulatory protein;
PDBTitle: crystal structure of glycerol uptake operon antiterminator regulatory2 protein from listeria monocytogenes str. 4b f2365
60d1xbia1
not modelled 63.9 8 Fold:Bacillus chorismate mutase-like
Superfamily:L30e-like
Family:L30e/L7ae ribosomal proteins
61d1vqof1
not modelled 62.4 11 Fold:Bacillus chorismate mutase-like
Superfamily:L30e-like
Family:L30e/L7ae ribosomal proteins
62c3pnnA_
not modelled 61.2 9 PDB header:transferase
Chain: A: PDB Molecule:conserved domain protein;
PDBTitle: the crystal structure of a glycosyltransferase from porphyromonas2 gingivalis w83
63c3o85A_
not modelled 58.9 6 PDB header:ribosomal protein
Chain: A: PDB Molecule:ribosomal protein l7ae;
PDBTitle: giardia lamblia 15.5kd rna binding protein
64d1e5ka_
not modelled 58.2 9 Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:Molybdenum cofactor biosynthesis protein MobA
65c3hl3A_
not modelled 57.6 12 PDB header:transferase
Chain: A: PDB Molecule:glucose-1-phosphate thymidylyltransferase;
PDBTitle: 2.76 angstrom crystal structure of a putative glucose-1-phosphate2 thymidylyltransferase from bacillus anthracis in complex with a3 sucrose.
66d1ll2a_
not modelled 56.8 11 Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:Glycogenin
67c3rsbB_
not modelled 53.3 13 PDB header:transferase
Chain: B: PDB Molecule:adenosylcobinamide-phosphate guanylyltransferase;
PDBTitle: structure of the archaeal gtp:adocbi-p guanylyltransferase (coby) from2 methanocaldococcus jannaschii
68c2xmhB_
not modelled 53.0 4 PDB header:transferase
Chain: B: PDB Molecule:ctp-inositol-1-phosphate cytidylyltransferase;
PDBTitle: the x-ray structure of ctp:inositol-1-phosphate2 cytidylyltransferase from archaeoglobus fulgidus
69c3f1cB_
not modelled 52.8 14 PDB header:transferase
Chain: B: PDB Molecule:putative 2-c-methyl-d-erythritol 4-phosphate
PDBTitle: crystal structure of 2-c-methyl-d-erythritol 4-phosphate2 cytidylyltransferase from listeria monocytogenes
70c3tqdA_
not modelled 51.4 10 PDB header:transferase
Chain: A: PDB Molecule:3-deoxy-manno-octulosonate cytidylyltransferase;
PDBTitle: structure of the 3-deoxy-d-manno-octulosonate cytidylyltransferase2 (kdsb) from coxiella burnetii
71c2qh5B_
not modelled 49.7 8 PDB header:isomerase
Chain: B: PDB Molecule:mannose-6-phosphate isomerase;
PDBTitle: crystal structure of mannose-6-phosphate isomerase from helicobacter2 pylori
72d2dpwa1
not modelled 49.5 4 Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:TTHA0179-like
73c1zcyA_
not modelled 48.5 11 PDB header:transferase
Chain: A: PDB Molecule:glycogenin-1;
PDBTitle: apo form of a mutant of glycogenin in which asp159 is replaced by ser
74c2y6pC_
not modelled 47.8 14 PDB header:transferase
Chain: C: PDB Molecule:3-deoxy-manno-octulosonate cytidylyltransferase;
PDBTitle: evidence for a two-metal-ion-mechanism in the2 kdo-cytidylyltransferase kdsb
75d2fc3a1
not modelled 42.4 9 Fold:Bacillus chorismate mutase-like
Superfamily:L30e-like
Family:L30e/L7ae ribosomal proteins
76d1xkna_
not modelled 41.0 16 Fold:Pentein, beta/alpha-propeller
Superfamily:Pentein
Family:Porphyromonas-type peptidylarginine deiminase
77d2ozba1
not modelled 39.4 8 Fold:Bacillus chorismate mutase-like
Superfamily:L30e-like
Family:L30e/L7ae ribosomal proteins
78d1qwja_
not modelled 38.3 14 Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:Cytidylytransferase
79c2zkr6_
not modelled 37.8 17 PDB header:ribosomal protein/rna
Chain: 6: PDB Molecule:60s ribosomal protein l30e;
PDBTitle: structure of a mammalian ribosomal 60s subunit within an 80s complex2 obtained by docking homology models of the rna and proteins into an3 8.7 a cryo-em map
80c4evwB_
not modelled 37.7 9 PDB header:transferase
Chain: B: PDB Molecule:nucleoside-diphosphate-sugar pyrophosphorylase;
PDBTitle: crystal structure of the nucleoside-diphosphate-sugar2 pyrophosphorylase from vibrio cholerae rc9. northeast structural3 genomics consortium (nesg) target vcr193.
81d2alea1
not modelled 36.7 5 Fold:Bacillus chorismate mutase-like
Superfamily:L30e-like
Family:L30e/L7ae ribosomal proteins
82d1g97a2
not modelled 35.8 8 Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:UDP-glucose pyrophosphorylase
83c3d98A_
not modelled 35.0 14 PDB header:transferase
Chain: A: PDB Molecule:bifunctional protein glmu;
PDBTitle: crystal structure of glmu from mycobacterium tuberculosis, ligand-free2 form
84d1t0ia_
not modelled 33.1 16 Fold:Flavodoxin-like
Superfamily:Flavoproteins
Family:NADPH-dependent FMN reductase
85c3ssoE_
not modelled 32.7 20 PDB header:transferase
Chain: E: PDB Molecule:methyltransferase;
PDBTitle: myce methyltransferase from the mycinamycin biosynthetic pathway in2 complex with mg and sah, crystal form 2
86d2cu2a2
not modelled 32.4 8 Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:mannose-1-phosphate guanylyl transferase
87c2j0bA_
not modelled 30.0 23 PDB header:transferase
Chain: A: PDB Molecule:beta-1,3-n-acetylglucosaminyltransferase manic fringe;
PDBTitle: structure of the catalytic domain of mouse manic fringe in2 complex with udp and manganese
88c1zctB_
not modelled 29.3 10 PDB header:transferase
Chain: B: PDB Molecule:glycogenin-1;
PDBTitle: structure of glycogenin truncated at residue 270 in a2 complex with udp
89d1vh1a_
not modelled 28.5 11 Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:Cytidylytransferase
90c3tztB_
not modelled 27.2 9 PDB header:transferase
Chain: B: PDB Molecule:glycosyl transferase family 8;
PDBTitle: the structure of a protein in glycosyl transferase family 8 from2 anaerococcus prevotii.
91c2pa4B_
not modelled 26.8 16 PDB header:transferase
Chain: B: PDB Molecule:utp-glucose-1-phosphate uridylyltransferase;
PDBTitle: crystal structure of udp-glucose pyrophosphorylase from corynebacteria2 glutamicum in complex with magnesium and udp-glucose
92d1egoa_
not modelled 25.3 10 Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:Thioltransferase
93c3io3A_
not modelled 25.2 18 PDB header:chaperone
Chain: A: PDB Molecule:deha2d07832p;
PDBTitle: get3 with adp from d. hansenii in closed form
94c2e3dB_
not modelled 25.2 12 PDB header:transferase
Chain: B: PDB Molecule:utp--glucose-1-phosphate uridylyltransferase;
PDBTitle: crystal structure of e. coli glucose-1-phosphate2 uridylyltransferase
95d1dxya2
not modelled 24.4 7 Fold:Flavodoxin-like
Superfamily:Formate/glycerate dehydrogenase catalytic domain-like
Family:Formate/glycerate dehydrogenases, substrate-binding domain
96d1vqom1
not modelled 23.6 18 Fold:Ribosomal proteins S24e, L23 and L15e
Superfamily:Ribosomal proteins S24e, L23 and L15e
Family:L15e
97d1ffki_
not modelled 23.3 7 Fold:Ribosomal proteins S24e, L23 and L15e
Superfamily:Ribosomal proteins S24e, L23 and L15e
Family:L15e
98d1jj2l_
not modelled 22.7 13 Fold:Ribosomal proteins S24e, L23 and L15e
Superfamily:Ribosomal proteins S24e, L23 and L15e
Family:L15e
99c1vl6C_
not modelled 22.6 14 PDB header:oxidoreductase
Chain: C: PDB Molecule:malate oxidoreductase;
PDBTitle: crystal structure of nad-dependent malic enzyme (tm0542) from2 thermotoga maritima at 2.61 a resolution
100c4a1cL_
not modelled 22.3 18 PDB header:ribosome
Chain: L: PDB Molecule:ribosomal protein l15;
PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna,3 5.8s rrna and proteins of molecule 4.
101c3k9gA_
not modelled 22.0 14 PDB header:biosynthetic protein
Chain: A: PDB Molecule:pf-32 protein;
PDBTitle: crystal structure of a plasmid partition protein from borrelia2 burgdorferi at 2.25a resolution, iodide soak
102c2cu2A_
not modelled 21.6 10 PDB header:transferase
Chain: A: PDB Molecule:putative mannose-1-phosphate guanylyl transferase;
PDBTitle: crystal structure of mannose-1-phosphate geranyltransferase from2 thermus thermophilus hb8
103c2c0nA_
not modelled 21.2 14 PDB header:viral protein/transferase
Chain: A: PDB Molecule:a197;
PDBTitle: crystal structure of a197 from stiv
104c3ma0A_
not modelled 20.9 10 PDB header:sugar binding protein
Chain: A: PDB Molecule:d-xylose-binding periplasmic protein;
PDBTitle: closed liganded crystal structure of xylose binding protein from2 escherichia coli
105c1s1iL_
not modelled 20.7 7 PDB header:ribosome
Chain: L: PDB Molecule:60s ribosomal protein l15-a;
PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1i,4 contains 60s subunit. the 40s ribosomal subunit is in file5 1s1h.

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