PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3f1cB_

Fold library id	PDB Header	Molecule	Title
c3f1cB_	PDB header: transferase	Chain: B: PDB Molecule: putative 2-c-methyl-d-erythritol 4-phosphate	PDBTitle: crystal structure of 2-c-methyl-d-erythritol 4-phosphate2 cytidylyltransferase from listeria monocytogenes

Links to external resources
Added to library: Tue Mar 16 12:25:50 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S L I Y A Q I L A G M G N V S M P K Q F L P L N G K P I I V H T V E K F I L N T R F D K I L I S S P K E W M N H A E D N I K K Y I S D D R I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T S
G G G S T T T
T T
S
G G G
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence V V I E G G E D R N E T I M N G I R F V E K T Y G L T D D D I I V T H D A V R P F L T H R I I E E N I D A A L E T G A V D T V I E A L D T I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T
T T
T T
T T
T S
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V E S S N H E V I T D I P V R D H M Y Q G Q T P Q S F N M K K V F N H Y Q N L T P E K K Q I L T D A C K I C L L A G D D V K L V K G E I F N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
S S S S S
B
G G G
T S
T
T T

. . . . . . . . . 220 . . . . . . . . . 230

Sequence I K I T T P Y D L K V A N A I I Q E R I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	L	I	Y	A	Q	I	L	A	G	M	G	N	V	S	M	P	K	Q	F	L	P	L	N	G	K	P	I	I	V	H	T	V	E	K	F	I	L	N	T	R	F	D	K	I	L	I	S	S	P	K	E	W	M	N	H	A	E	D	N	I	K	K	Y	I	S	D	D	R	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T	T	S			G	G	G	S			T	T													T		T	T		S								G	G	G															T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	V	I	E	G	G	E	D	R	N	E	T	I	M	N	G	I	R	F	V	E	K	T	Y	G	L	T	D	D	D	I	I	V	T	H	D	A	V	R	P	F	L	T	H	R	I	I	E	E	N	I	D	A	A	L	E	T	G	A	V	D	T	V	I	E	A	L	D	T	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S																T				T	T								T	T		T	T																T	S									S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	E	S	S	N	H	E	V	I	T	D	I	P	V	R	D	H	M	Y	Q	G	Q	T	P	Q	S	F	N	M	K	K	V	F	N	H	Y	Q	N	L	T	P	E	K	K	Q	I	L	T	D	A	C	K	I	C	L	L	A	G	D	D	V	K	L	V	K	G	E	I	F	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B		S	S	S	S	S			B				G	G	G																					T	S																			T										T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Sequence	I	K	I	T	T	P	Y	D	L	K	V	A	N	A	I	I	Q	E	R	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S