PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c1jylC_

Fold library id	PDB Header	Molecule	Title
c1jylC_	PDB header: transferase	Chain: C: PDB Molecule: ctp:phosphocholine cytidylytransferase;	PDBTitle: catalytic mechanism of ctp:phosphocholine2 cytidylytransferase from streptococcus pneumoniae (licc)

Links to external resources
Added to library: Tue Mar 16 12:41:44 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence I R V K A I I L A A G L G T R L R P L T E N T P K A L V Q V N Q K P L I E Y Q I E F L K E K G I N D I I I I V G Y L K E Q F D Y L K E K Y G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
G G G T T T T S S S
G G G
B S S S S B T T
T T G G G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence V R L V F N D K Y A D Y N N F Y S L Y L V K E E L A N S Y V I D A D N Y L F K N M F R N D L T R S T Y F S V Y R E D C T N E W F L V Y G D D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T T S
T T G G G
T T S S S S
S
S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Y K V Q D I I V D S K A G R I L S G V S F W D A P T A E K I V S F I D K A Y V S G E F V D L Y W D N M V K D N I K E L D V Y V E E L E G N S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
S
S
S S
T T T S G G G
S S

. . . . . . . . . 220 . . . . . . . .

Sequence I Y E I D S V Q D Y R K L E E I L K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	I	R	V	K	A	I	I	L	A	A	G	L	G	T	R	L	R	P	L	T	E	N	T	P	K	A	L	V	Q	V	N	Q	K	P	L	I	E	Y	Q	I	E	F	L	K	E	K	G	I	N	D	I	I	I	I	V	G	Y	L	K	E	Q	F	D	Y	L	K	E	K	Y	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S			G	G	G	T	T	T	T	S	S	S		G	G	G		B	S	S	S	S	B												T	T										T	T	G	G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	R	L	V	F	N	D	K	Y	A	D	Y	N	N	F	Y	S	L	Y	L	V	K	E	E	L	A	N	S	Y	V	I	D	A	D	N	Y	L	F	K	N	M	F	R	N	D	L	T	R	S	T	Y	F	S	V	Y	R	E	D	C	T	N	E	W	F	L	V	Y	G	D	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	T	T	T	S		T							T	G	G	G		T	T						S	S				S	S					S				S																					T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Y	K	V	Q	D	I	I	V	D	S	K	A	G	R	I	L	S	G	V	S	F	W	D	A	P	T	A	E	K	I	V	S	F	I	D	K	A	Y	V	S	G	E	F	V	D	L	Y	W	D	N	M	V	K	D	N	I	K	E	L	D	V	Y	V	E	E	L	E	G	N	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B																S																							S			S	S			T	T					T	S	G	G	G										S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Sequence	I	Y	E	I	D	S	V	Q	D	Y	R	K	L	E	E	I	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S											T