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| Protein Homology/analogY Recognition Engine V 2.0 | ||||||
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| Protein Homology/analogY Recognition Engine V 2.0 | ||||||
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| Fold library id | PDB Header | Molecule | Title |
|---|---|---|---|
| c1s1iL_ | PDB header: ribosome | Chain: L: PDB Molecule: 60s ribosomal protein l15-a; | PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1i,4 contains 60s subunit. the 40s ribosomal subunit is in file5 1s1h. |
| Added to library: Tue Mar 16 12:35:30 2010 | |
| Links to external resources | |
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| 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | |
| Sequence | A | Y | K | Y | L | E | E | L | Q | R | K | K | Q | S | D | V | L | R | F | L | Q | R | V | R | V | W | E | Y | R | Q | K | N | V | I | H | R | A | A | R | P | T | R | P | D | K | A | R | R | L | G | Y | K | A | K | Q | G | F | V | I | Y | R | V | R | V | R | R | G | N | R | K |
| Predicted secondary structure |  | | | | | | | | | | | | | | | | | | | | | | | | | | |  | | |  | | | | | | | | | | | | | | | | | | | |||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | | | | | | | | | S | S | S | S | | | | | | | | S | S | | | | | T | T | S | S | B | S | S | S | S | T | T | T | T | T | T | S | S | S | S | T | T | | | | | S | S | S | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
| Sequence | R | P | V | P | K | G | A | T | Y | G | K | P | T | N | Q | G | V | N | E | L | K | Y | Q | R | S | L | R | A | T | A | E | E | R | V | G | R | R | A | A | N | L | R | V | L | N | S | Y | W | V | N | Q | D | S | T | Y | K | Y | F | E | V | I | L | V | D | P | Q | H | K | A | I |
| Predicted secondary structure | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | S | S | S | S | S | S | T | T | S | S | T | T | | | | | S | S | S | S | S | S | S | S | S | S | S | | | | | S | S | S | T | T | T | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . |
| Sequence | R | R | D | A | R | Y | N | W | I | C | D | P | V | H | K | H | R | E | A | R | G | L | T | A | T | G | K | K | S | R | G | I | N | K | G | H | K | F | N | N | T | K | A | G | R | R | K | T | W | K | R | Q | N | T | ||||||||||||||||
| Predicted secondary structure | | | | | | | | | | | | | | | | | | | | | | | ||||||||||||||||||||||||||||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | T | T | S | S | T | T | S | S | S | S | S | S | S | S | S | T | T | T | S | S | S | S | T | T | S | S | S | S | S | S | S | S | S | S | S | S | S | S | S | S |
| Download: | PDB structure | FASTA sequence |
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