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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: d1xkna_

Fold library idFoldSuperfamilyFamily
d1xkna_Pentein, beta/alpha-propellerPenteinPorphyromonas-type peptidylarginine deiminase


Added to library: Tue Mar 16 12:02:30 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SEPTYFXPPEWAPHASTWLSWPHKLESWPGKFEPVPAVFAELAYQLSRSETVNINVLDDAXEAQARELLK
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Known secondary structure (DSSP)





TTS




GGGSTT

TTSSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence ERDPEGKYAERIVFHRIPTNDAWCRDHGPNYVIRTQDGRRDKVIXNWEYNAWGGKYEPYDDDNAVPERVA
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Known secondary structure (DSSP)
TT
TTGGG


SSS
S
TT

TSS

 .........150.........160.........170.........180.........190.........200.........210
Sequence KAQGLPXVSTGXVLEGGAIDVNGAGLLLTTTACLLNPNRNPSLGKAEIEAQLRRYLGIEKVLWLGDGIAG
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Known secondary structure (DSSP) T



GGG
SSST
TTT
TT



S



TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence DDTDGHVDDXARFVNENTVVIAVEEDPEDENYKPLRENYELLKTXTGLDGKPLNIVKLPXPEPVYYDGER
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Known secondary structure (DSSP)
TTSS
GGGTTT



TTSTTTT
B
TTS
B



S

TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence LPASYANFYIANTVVLVPTYRCPRDQQAIDILQQCFPKREVVGIDCSDLIWGLGAIHCVTHEEPAXLEHH
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Known secondary structure (DSSP)



TT


SS
SST
TTS
TTGGGGS

TTTT



S
T
 ...
Sequence HHH
Predicted secondary structure


SS confidence


Known secondary structure (DSSP) TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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