PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3polA_

Fold library id	PDB Header	Molecule	Title
c3polA_	PDB header: transferase	Chain: A: PDB Molecule: 3-deoxy-manno-octulosonate cytidylyltransferase;	PDBTitle: 2.3 angstrom crystal structure of 3-deoxy-manno-octulosonate2 cytidylyltransferase (kdsb) from acinetobacter baumannii.

Links to external resources
Added to library: Sat Dec 11 13:58:00 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G H I D D D D K H M K H I V I P A R F S S S R L P G K P L L L I H D R P M I L R V V D Q A K K V E G F D D L C V A T D D E R I A E I C R A E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T
S
T T S T T G G G S T T T T
S
S S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G V D V V L T S A D H P S G T D R L S E V A R I K G W D A D D I I V N V Q G D E P L L P A Q L V Q Q V A K L L V D K P N C S M S T L C E P I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S
T
T T
T T
T T
T T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence H A L D E F Q R D S I V K V V M S K Q N E A L Y F S R A T I P Y D R D G A K R D E P T L H T Q A F R H L G L Y A Y R V S L L Q E Y V T W E M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
S S S B S S
S
S S S S S S S S
S
T T S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . .

Sequence G K L E K L E S L E Q L R V L E N G H R I A I A V A E A N L P P G V D T Q A D L D R L N N M P V E S F E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
T T T T
S S
S T S
G G G G

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	H	I	D	D	D	D	K	H	M	K	H	I	V	I	P	A	R	F	S	S	S	R	L	P	G	K	P	L	L	L	I	H	D	R	P	M	I	L	R	V	V	D	Q	A	K	K	V	E	G	F	D	D	L	C	V	A	T	D	D	E	R	I	A	E	I	C	R	A	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S		T	T												S			T	T	S	T	T	G	G	G	S			T	T												T	T			S		S							S										T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	V	D	V	V	L	T	S	A	D	H	P	S	G	T	D	R	L	S	E	V	A	R	I	K	G	W	D	A	D	D	I	I	V	N	V	Q	G	D	E	P	L	L	P	A	Q	L	V	Q	Q	V	A	K	L	L	V	D	K	P	N	C	S	M	S	T	L	C	E	P	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T								S																	T			T	T								T	T		T	T																	T	T		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	H	A	L	D	E	F	Q	R	D	S	I	V	K	V	V	M	S	K	Q	N	E	A	L	Y	F	S	R	A	T	I	P	Y	D	R	D	G	A	K	R	D	E	P	T	L	H	T	Q	A	F	R	H	L	G	L	Y	A	Y	R	V	S	L	L	Q	E	Y	V	T	W	E	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	S							S	S	S	B						S	S			S			S	S	S	S	S	S	S	S					S																				T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Sequence	G	K	L	E	K	L	E	S	L	E	Q	L	R	V	L	E	N	G	H	R	I	A	I	A	V	A	E	A	N	L	P	P	G	V	D	T	Q	A	D	L	D	R	L	N	N	M	P	V	E	S	F	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T		T	T						T	T									S	S								S									T	S		G	G	G	G