Fold library entry viewer: c4fixA_

Added to library: Sat Jun 23 13:21:28 2012
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	S	E	L	A	A	S	L	L	S	R	V	I	L	P	R	P	G	E	P	L	D	V	R	K	L	Y	L	E	E	S	T	T	N	A	R	R	A	H	A	P	T	R	T	S	L	Q	I	G	A	E	S	E	V	S	F	A	T	Y	F	N	A	F	P	A	S	Y	W	R	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T															T	T							T	T	T					T	T	S	S	S							T	T						T	T							S	T	T	T	S	B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	W	T	T	C	K	S	V	V	L	R	V	Q	V	T	G	A	G	R	V	D	V	Y	R	T	K	A	T	G	A	R	I	F	V	E	G	H	D	F	T	G	T	E	D	Q	P	A	A	V	E	T	E	V	V	L	Q	P	F	E	D	G	G	W	V	W	F	D	I	T	T	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B	S		S																					T	T															S	S	S										S	T	T		S	S	B										S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	A	V	T	L	H	S	G	G	W	Y	A	T	S	P	A	P	G	T	A	N	I	A	V	G	I	P	T	F	N	R	P	A	D	C	V	N	A	L	R	E	L	T	A	D	P	L	V	D	Q	V	I	G	A	V	I	V	P	D	Q	G	E	R	K	V	R	D	H	P	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S												S	S				S										B	S	S													T	T	S					T	T										S	S	S		G	G	G	S	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	F	P	A	A	A	A	R	L	G	S	R	L	S	I	H	D	Q	P	N	L	G	G	S	G	G	Y	S	R	V	M	Y	E	A	L	K	N	T	D	C	Q	Q	I	L	F	M	D	D	D	I	R	L	E	P	D	S	I	L	R	V	L	A	M	H	R	F	A	K	A	P	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									G	G	G																													S							S	S					T													B	S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	L	V	G	G	Q	M	L	N	L	Q	E	P	S	H	L	H	I	M	G	E	V	V	D	R	S	I	F	M	W	T	A	A	P	H	A	E	Y	D	H	D	F	A	E	Y	P	L	N	D	N	N	S	R	S	K	L	L	H	R	R	I	D	V	D	Y	N	G	W	W	T	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	S	T	T					S						T	T	T	T						T	T			S				T	T	T	S		S	S		S	S					G	G	G	B					S	B			T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	M	I	P	R	Q	V	A	E	E	L	G	Q	P	L	P	L	F	I	K	W	D	D	A	D	Y	G	L	R	A	A	E	H	G	Y	P	T	V	T	L	P	G	A	A	I	W	H	M	A	W	S	D	K	D	D	A	I	D	W	Q	A	Y	F	H	L	R	N	R	L	V	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S			S		S	S	S	S												T	T																S	S	S	S			T	T	S	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	A	A	M	H	W	D	G	P	K	A	Q	V	I	G	L	V	R	S	H	L	K	A	T	L	K	H	L	A	C	L	E	Y	S	T	V	A	I	Q	N	K	A	I	D	D	F	L	A	G	P	E	H	I	F	S	I	L	E	S	A	L	P	Q	V	H	R	I	R	K	S	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S		G	G	G																		T	T																	T								T	T	T	T										T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	P	D	A	V	V	L	P	A	A	S	E	L	P	P	P	L	H	K	N	K	A	M	K	P	P	V	N	P	L	V	I	G	Y	R	L	A	R	G	I	M	H	N	L	T	A	A	N	P	Q	H	H	R	R	P	E	F	N	V	P	T	Q	D	A	R	W	F	L	L	C	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G			B	S		G	G	G	S				S	S										S																T	S				G	G	G	G	T	S		S					G	G	G							T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.
Sequence	V	D	G	A	T	V	T	T	A	D	G	C	G	V	V	Y	R	Q	R	D	R	A	K	M	F	A	L	L	W	Q	S	L	R	R	Q	R	Q	L	L	K	R	F	E	E	M	R	R	I	Y	R	D	A	L	P	T	L	S	S	K	Q	K	W	E	T	A	L	L	P	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S							T	T	S	S																																								T															S

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PDB structure

FASTA sequence

Hidden Markov model

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