PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c2vshB_

Fold library id	PDB Header	Molecule	Title
c2vshB_	PDB header: transferase	Chain: B: PDB Molecule: 2-c-methyl-d-erythritol 4-phosphate	PDBTitle: synthesis of cdp-activated ribitol for teichoic acid2 precursors in streptococcus pneumoniae

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Added to library: Tue Mar 16 12:32:05 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence H M I Y A G I L A G P K Q F L E L G D R P I L I H T I E K F V L E P S I E K I V V G V H G D W V S H A E D L V D K Y L P L Y K E R I I I T K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G S T T T
T T
G G G
G G G G G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G G A D R N T S I K N I I E A I D A Y R P L T P E D I V V T H D S V R P F I T L R M I Q D N I Q L A Q N H D A V D T V V E A V D T I V E S T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
T T
T T
T T
S S S
S
B
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence N G Q F I T D I P N R A H L Y Q G Q T P Q T F R C K D F M D L Y G S L S D E E K E I L T D A C K I F V I K G K D V A L A K G E Y S N L K I T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S S
S B
G G G
T
S T T
T T

. . . . . . . . . 220 . .

Sequence T V T D L K I A K S M I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	H	M	I	Y	A	G	I	L	A	G	P	K	Q	F	L	E	L	G	D	R	P	I	L	I	H	T	I	E	K	F	V	L	E	P	S	I	E	K	I	V	V	G	V	H	G	D	W	V	S	H	A	E	D	L	V	D	K	Y	L	P	L	Y	K	E	R	I	I	I	T	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												G	G	G	S			T	T													T		T	T										G	G	G													G	G	G	G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	G	A	D	R	N	T	S	I	K	N	I	I	E	A	I	D	A	Y	R	P	L	T	P	E	D	I	V	V	T	H	D	S	V	R	P	F	I	T	L	R	M	I	Q	D	N	I	Q	L	A	Q	N	H	D	A	V	D	T	V	V	E	A	V	D	T	I	V	E	S	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S																S				T	T								T	T		T	T															S	S	S										S				B		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	G	Q	F	I	T	D	I	P	N	R	A	H	L	Y	Q	G	Q	T	P	Q	T	F	R	C	K	D	F	M	D	L	Y	G	S	L	S	D	E	E	K	E	I	L	T	D	A	C	K	I	F	V	I	K	G	K	D	V	A	L	A	K	G	E	Y	S	N	L	K	I	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S	S		S	B				G	G	G																					T											S								T	T										T	T
	.	.	.	.	.	.	.	.	.	220	.	.
Sequence	T	V	T	D	L	K	I	A	K	S	M	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S