Email l.a.kelley@imperial.ac.uk Description Q46896 Date Thu Jan 5 12:35:36 GMT 2012 Unique Job ID be002e84e4cf9d7f

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3nkdB_ 100.0 99 PDB header:immune system Chain: B: PDB Molecule:crispr-associated protein cas1; PDBTitle: structure of crisp-associated protein cas1 from escherichia coli str.2 k-12 2 c3godA_ 100.0 25 PDB header:immune system Chain: A: PDB Molecule:cas1; PDBTitle: structural basis for dnase activity of a conserved protein2 implicated in crispr-mediated antiviral defense 3 c3lfxE_ 100.0 18 PDB header:structural genomics, unknown function Chain: E: PDB Molecule:uncharacterized protein; PDBTitle: structure of tm1797, a cas1 protein from thermotoga maritima 4 c2yzsB_ 100.0 17 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of uncharacterized conserved protein from2 aquifex aeolicus 5 c3pv9D_ 100.0 17 PDB header:immune system Chain: D: PDB Molecule:putative uncharacterized protein ph1245; PDBTitle: structure of ph1245, a cas1 from pyrococcus horikoshii 6 c3nkeA_ 100.0 99 PDB header:immune system Chain: A: PDB Molecule:protein ygbt; PDBTitle: high resolution structure of the c-terminal domain crisp-associated2 protein cas1 from escherichia coli str. k-12 7 d1p3da1 73.8 3 Fold:MurCD N-terminal domain Superfamily:MurCD N-terminal domain Family:MurCD N-terminal domain 8 d2jfga1 71.5 26 Fold:MurCD N-terminal domain Superfamily:MurCD N-terminal domain Family:MurCD N-terminal domain 9 d1j6ua1 63.4 10 Fold:MurCD N-terminal domain Superfamily:MurCD N-terminal domain Family:MurCD N-terminal domain 10 d2ioja1 48.3 13 Fold:MurF and HprK N-domain-like Superfamily:HprK N-terminal domain-like Family:DRTGG domain 11 c1jrxA_ 42.1 19 PDB header:oxidoreductase Chain: A: PDB Molecule:flavocytochrome c; PDBTitle: crystal structure of arg402ala mutant flavocytochrome c32 from shewanella frigidimarina 12 c3nixF_ 39.1 20 PDB header:oxidoreductase Chain: F: PDB Molecule:flavoprotein/dehydrogenase; PDBTitle: crystal structure of flavoprotein/dehydrogenase from cytophaga2 hutchinsonii. northeast structural genomics consortium target chr43. 13 c2hbpA_ 37.0 13 PDB header:endocytosis, protein binding Chain: A: PDB Molecule:cytoskeleton assembly control protein sla1; PDBTitle: solution structure of sla1 homology domain 1 14 c3lhlA_ 33.6 7 PDB header:hydrolase Chain: A: PDB Molecule:putative agmatinase; PDBTitle: crystal structure of a putative agmatinase from clostridium difficile 15 c1qo8A_ 33.3 19 PDB header:oxidoreductase Chain: A: PDB Molecule:flavocytochrome c3 fumarate reductase; PDBTitle: the structure of the open conformation of a flavocytochrome2 c3 fumarate reductase 16 c2aczA_ 27.2 18 PDB header:oxidoreductase/electron transport Chain: A: PDB Molecule:succinate dehydrogenase flavoprotein subunit; PDBTitle: complex ii (succinate dehydrogenase) from e. coli with atpenin a52 inhibitor co-crystallized at the ubiquinone binding site 17 c2f00A_ 26.7 6 PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramate--l-alanine ligase; PDBTitle: escherichia coli murc 18 d1woha_ 26.6 19 Fold:Arginase/deacetylase Superfamily:Arginase/deacetylase Family:Arginase-like amidino hydrolases 19 c3mlqH_ 22.8 20 PDB header:transferase/transcription Chain: H: PDB Molecule:transcription-repair coupling factor; PDBTitle: crystal structure of the thermus thermophilus transcription-repair2 coupling factor rna polymerase interacting domain with the thermus3 aquaticus rna polymerase beta1 domain 20 c1yq4A_ 21.6 23 PDB header:oxidoreductase Chain: A: PDB Molecule:succinate dehydrogenase flavoprotein subunit; PDBTitle: avian respiratory complex ii with 3-nitropropionate and ubiquinone 21 c3nipB_ not modelled 20.6 10 PDB header:hydrolase Chain: B: PDB Molecule:3-guanidinopropionase; PDBTitle: crystal structure of pseudomonas aeruginosa guanidinopropionase2 complexed with 1,6-diaminohexane 22 c3m1rF_ not modelled 20.1 17 PDB header:hydrolase Chain: F: PDB Molecule:formimidoylglutamase; PDBTitle: the crystal structure of formimidoylglutamase from bacillus2 subtilis subsp. subtilis str. 168 23 c3ff4A_ not modelled 19.8 8 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of uncharacterized protein chu_1412 24 d1neka2 not modelled 19.6 18 Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain 25 d2aeba1 not modelled 19.6 13 Fold:Arginase/deacetylase Superfamily:Arginase/deacetylase Family:Arginase-like amidino hydrolases 26 d1xfka_ not modelled 18.5 23 Fold:Arginase/deacetylase Superfamily:Arginase/deacetylase Family:Arginase-like amidino hydrolases 27 d2d59a1 not modelled 18.5 17 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:CoA-binding domain 28 d1gq6a_ not modelled 18.4 23 Fold:Arginase/deacetylase Superfamily:Arginase/deacetylase Family:Arginase-like amidino hydrolases 29 c1jqoA_ not modelled 18.3 20 PDB header:lyase Chain: A: PDB Molecule:phosphoenolpyruvate carboxylase; PDBTitle: crystal structure of c4-form phosphoenolpyruvate carboxylase from2 maize 30 d1jqoa_ not modelled 18.3 20 Fold:TIM beta/alpha-barrel Superfamily:Phosphoenolpyruvate/pyruvate domain Family:Phosphoenolpyruvate carboxylase 31 d1pq3a_ not modelled 17.6 17 Fold:Arginase/deacetylase Superfamily:Arginase/deacetylase Family:Arginase-like amidino hydrolases 32 d1zhva2 not modelled 17.2 11 Fold:Ferredoxin-like Superfamily:ACT-like Family:Atu0741-like 33 c1d4cB_ not modelled 16.6 13 PDB header:oxidoreductase Chain: B: PDB Molecule:flavocytochrome c fumarate reductase; PDBTitle: crystal structure of the uncomplexed form of the2 flavocytochrome c fumarate reductase of shewanella3 putrefaciens strain mr-1 34 c2cunA_ not modelled 16.5 13 PDB header:transferase Chain: A: PDB Molecule:phosphoglycerate kinase; PDBTitle: crystal structure of phosphoglycerate kinase from pyrococcus2 horikoshii ot3 35 c3bioB_ not modelled 15.5 13 PDB header:oxidoreductase Chain: B: PDB Molecule:oxidoreductase, gfo/idh/moca family; PDBTitle: crystal structure of oxidoreductase (gfo/idh/moca family member) from2 porphyromonas gingivalis w83 36 c1j6uA_ not modelled 15.0 9 PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramate-alanine ligase murc; PDBTitle: crystal structure of udp-n-acetylmuramate-alanine ligase2 murc (tm0231) from thermotoga maritima at 2.3 a resolution 37 c3ihgA_ not modelled 15.0 21 PDB header:flavoprotein, oxidoreductase Chain: A: PDB Molecule:rdme; PDBTitle: crystal structure of a ternary complex of aklavinone-112 hydroxylase with fad and aklavinone 38 c2e1mA_ not modelled 15.0 14 PDB header:oxidoreductase Chain: A: PDB Molecule:l-glutamate oxidase; PDBTitle: crystal structure of l-glutamate oxidase from streptomyces sp. x-119-6 39 d2q4qa1 not modelled 14.3 16 Fold:MTH938-like Superfamily:MTH938-like Family:MTH938-like 40 d1w4xa1 not modelled 13.8 22 Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:FAD/NAD-linked reductases, N-terminal and central domains 41 d1cr6a2 not modelled 13.7 16 Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:Epoxide hydrolase 42 d2a0ma1 not modelled 13.3 13 Fold:Arginase/deacetylase Superfamily:Arginase/deacetylase Family:Arginase-like amidino hydrolases 43 d1vpea_ not modelled 13.0 15 Fold:Phosphoglycerate kinase Superfamily:Phosphoglycerate kinase Family:Phosphoglycerate kinase 44 d1ko7a1 not modelled 12.9 15 Fold:MurF and HprK N-domain-like Superfamily:HprK N-terminal domain-like Family:HPr kinase/phoshatase HprK N-terminal domain 45 d2ceva_ not modelled 12.9 13 Fold:Arginase/deacetylase Superfamily:Arginase/deacetylase Family:Arginase-like amidino hydrolases 46 d2ooxe2 not modelled 12.8 14 Fold:CBS-domain pair Superfamily:CBS-domain pair Family:CBS-domain pair 47 c3mlqE_ not modelled 12.8 26 PDB header:transferase/transcription Chain: E: PDB Molecule:transcription-repair coupling factor; PDBTitle: crystal structure of the thermus thermophilus transcription-repair2 coupling factor rna polymerase interacting domain with the thermus3 aquaticus rna polymerase beta1 domain 48 c2eivH_ not modelled 12.7 30 PDB header:hydrolase Chain: H: PDB Molecule:arginase; PDBTitle: crystal structure of the arginase from thermus thermophilus 49 d2fvta1 not modelled 12.6 13 Fold:MTH938-like Superfamily:MTH938-like Family:MTH938-like 50 c2kbrA_ not modelled 12.5 8 PDB header:structural protein/cell adhesion Chain: A: PDB Molecule:harmonin; PDBTitle: solution structure of harmonin n terminal domain in complex2 with a internal peptide of cadherin23 51 d1iuka_ not modelled 12.5 11 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:CoA-binding domain 52 d1v6sa_ not modelled 12.5 22 Fold:Phosphoglycerate kinase Superfamily:Phosphoglycerate kinase Family:Phosphoglycerate kinase 53 c2pd2A_ not modelled 12.1 9 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein st0148; PDBTitle: crystal structure of (st0148) conserved hypothetical from sulfolobus2 tokodaii strain7 54 d1phpa_ not modelled 12.1 15 Fold:Phosphoglycerate kinase Superfamily:Phosphoglycerate kinase Family:Phosphoglycerate kinase 55 d1gsoa2 not modelled 12.0 10 Fold:PreATP-grasp domain Superfamily:PreATP-grasp domain Family:BC N-terminal domain-like 56 d1ybha1 not modelled 12.0 9 Fold:DHS-like NAD/FAD-binding domain Superfamily:DHS-like NAD/FAD-binding domain Family:Pyruvate oxidase and decarboxylase, middle domain 57 d1zvpa2 not modelled 11.8 13 Fold:Ferredoxin-like Superfamily:ACT-like Family:VC0802-like 58 d1zd3a2 not modelled 11.7 19 Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:Epoxide hydrolase 59 c3do5A_ not modelled 11.5 18 PDB header:oxidoreductase Chain: A: PDB Molecule:homoserine dehydrogenase; PDBTitle: crystal structure of putative homoserine dehydrogenase (np_069768.1)2 from archaeoglobus fulgidus at 2.20 a resolution 60 d1d3va_ not modelled 11.3 13 Fold:Arginase/deacetylase Superfamily:Arginase/deacetylase Family:Arginase-like amidino hydrolases 61 c3mmrA_ not modelled 11.1 13 PDB header:hydrolase Chain: A: PDB Molecule:arginase; PDBTitle: structure of plasmodium falciparum arginase in complex with abh 62 c3cpiH_ not modelled 11.1 14 PDB header:protein transport Chain: H: PDB Molecule:rab gdp-dissociation inhibitor; PDBTitle: crystal structure of yeast rab-gdi 63 c2qa2A_ not modelled 10.9 12 PDB header:oxidoreductase Chain: A: PDB Molecule:polyketide oxygenase cabe; PDBTitle: crystal structure of cabe, an aromatic hydroxylase from angucycline2 biosynthesis, determined to 2.7 a resolution 64 c1zmrA_ not modelled 10.9 20 PDB header:transferase Chain: A: PDB Molecule:phosphoglycerate kinase; PDBTitle: crystal structure of the e. coli phosphoglycerate kinase 65 c1s1hB_ not modelled 10.8 12 PDB header:ribosome Chain: B: PDB Molecule:40s ribosomal protein s0-a; PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1h,4 contains 40s subunit. the 60s ribosomal subunit is in file5 1s1i. 66 c2duwA_ not modelled 10.7 11 PDB header:ligand binding protein Chain: A: PDB Molecule:putative coa-binding protein; PDBTitle: solution structure of putative coa-binding protein of2 klebsiella pneumoniae 67 d2eyqa1 not modelled 10.6 20 Fold:SH3-like barrel Superfamily:CarD-like Family:CarD-like 68 d2gf3a1 not modelled 10.4 18 Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:FAD-linked reductases, N-terminal domain 69 c2dkhA_ not modelled 10.4 18 PDB header:oxidoreductase Chain: A: PDB Molecule:3-hydroxybenzoate hydroxylase; PDBTitle: crystal structure of 3-hydroxybenzoate hydroxylase from comamonas2 testosteroni, in complex with the substrate 70 d2fi9a1 not modelled 10.2 9 Fold:MTH938-like Superfamily:MTH938-like Family:MTH938-like 71 c3pzlA_ not modelled 10.1 27 PDB header:hydrolase Chain: A: PDB Molecule:agmatine ureohydrolase; PDBTitle: the crystal structure of agmatine ureohydrolase of thermoplasma2 volcanium 72 d2nmla1 not modelled 10.1 24 Fold:ERH-like Superfamily:ERH-like Family:ERH-like 73 c3q3vA_ not modelled 9.8 14 PDB header:transferase Chain: A: PDB Molecule:phosphoglycerate kinase; PDBTitle: crystal structure of phosphoglycerate kinase from campylobacter2 jejuni. 74 c2r4jA_ not modelled 9.8 17 PDB header:oxidoreductase Chain: A: PDB Molecule:aerobic glycerol-3-phosphate dehydrogenase; PDBTitle: crystal structure of escherichia coli semet substituted2 glycerol-3-phosphate dehydrogenase in complex with dhap 75 c3fwzA_ not modelled 9.7 16 PDB header:membrane protein Chain: A: PDB Molecule:inner membrane protein ybal; PDBTitle: crystal structure of trka-n domain of inner membrane protein ybal from2 escherichia coli 76 c3nioF_ not modelled 9.6 21 PDB header:hydrolase Chain: F: PDB Molecule:guanidinobutyrase; PDBTitle: crystal structure of pseudomonas aeruginosa guanidinobutyrase 77 d1otha2 not modelled 9.5 19 Fold:ATC-like Superfamily:Aspartate/ornithine carbamoyltransferase Family:Aspartate/ornithine carbamoyltransferase 78 d2bcgg1 not modelled 9.2 14 Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:GDI-like N domain 79 d1euca1 not modelled 9.1 17 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:CoA-binding domain 80 c2yg4B_ not modelled 9.0 13 PDB header:oxidoreductase Chain: B: PDB Molecule:putrescine oxidase; PDBTitle: structure-based redesign of cofactor binding in putrescine2 oxidase: wild type bound to putrescine 81 c1oy5B_ not modelled 8.7 16 PDB header:transferase Chain: B: PDB Molecule:trna (guanine-n(1)-)-methyltransferase; PDBTitle: crystal structure of trna (m1g37) methyltransferase from aquifex2 aeolicus 82 d1oy5a_ not modelled 8.7 16 Fold:alpha/beta knot Superfamily:alpha/beta knot Family:tRNA(m1G37)-methyltransferase TrmD 83 c3mpoD_ not modelled 8.7 24 PDB header:hydrolase Chain: D: PDB Molecule:predicted hydrolase of the had superfamily; PDBTitle: the crystal structure of a hydrolase from lactobacillus brevis 84 c2rgoA_ not modelled 8.6 18 PDB header:oxidoreductase Chain: A: PDB Molecule:alpha-glycerophosphate oxidase; PDBTitle: structure of alpha-glycerophosphate oxidase from2 streptococcus sp.: a template for the mitochondrial alpha-3 glycerophosphate dehydrogenase 85 d1y81a1 not modelled 8.5 17 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:CoA-binding domain 86 c2p58A_ not modelled 8.4 15 PDB header:transport protein/chaperone Chain: A: PDB Molecule:putative type iii secretion protein ysce; PDBTitle: structure of the yersinia pestis type iii secretion system2 needle protein yscf in complex with its chaperones3 ysce/yscg 87 c3fmwC_ not modelled 8.3 9 PDB header:oxidoreductase Chain: C: PDB Molecule:oxygenase; PDBTitle: the crystal structure of mtmoiv, a baeyer-villiger2 monooxygenase from the mithramycin biosynthetic pathway in3 streptomyces argillaceus. 88 d2ozga1 not modelled 8.3 13 Fold:SCP-like Superfamily:SCP-like Family:EF1021 C-terminal domain-like 89 c3nyeA_ not modelled 8.3 14 PDB header:oxidoreductase Chain: A: PDB Molecule:d-arginine dehydrogenase; PDBTitle: crystal structure of pseudomonas aeruginosa d-arginine dehydrogenase2 in complex with imino-arginine 90 d1zcza2 not modelled 8.2 12 Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC 91 c1zvpB_ not modelled 8.1 13 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein vc0802; PDBTitle: crystal structure of a protein of unknown function vc0802 from vibrio2 cholerae, possible transport protein 92 c2l2qA_ not modelled 8.1 15 PDB header:transferase Chain: A: PDB Molecule:pts system, cellobiose-specific iib component (cela); PDBTitle: solution structure of cellobiose-specific phosphotransferase iib2 component protein from borrelia burgdorferi 93 d3coxa1 not modelled 8.1 26 Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:FAD-linked reductases, N-terminal domain 94 c2d6fA_ not modelled 7.9 20 PDB header:ligase/rna Chain: A: PDB Molecule:glutamyl-trna(gln) amidotransferase subunit d; PDBTitle: crystal structure of glu-trna(gln) amidotransferase in the2 complex with trna(gln) 95 d1rlga_ not modelled 7.9 9 Fold:Bacillus chorismate mutase-like Superfamily:L30e-like Family:L30e/L7ae ribosomal proteins 96 d2cvza1 not modelled 7.8 22 Fold:6-phosphogluconate dehydrogenase C-terminal domain-like Superfamily:6-phosphogluconate dehydrogenase C-terminal domain-like Family:Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain 97 d2npta1 not modelled 7.7 12 Fold:beta-Grasp (ubiquitin-like) Superfamily:CAD & PB1 domains Family:PB1 domain 98 c3l78A_ not modelled 7.6 9 PDB header:transcription Chain: A: PDB Molecule:regulatory protein spx; PDBTitle: the crystal structure of smu.1142c from streptococcus mutans ua159 99 c3nbmA_ not modelled 7.5 24 PDB header:transferase Chain: A: PDB Molecule:pts system, lactose-specific iibc components; PDBTitle: the lactose-specific iib component domain structure of the2 phosphoenolpyruvate:carbohydrate phosphotransferase system (pts) from3 streptococcus pneumoniae.