Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3pzlA_

Fold library idPDB HeaderMoleculeTitle
c3pzlA_PDB header: hydrolaseChain: A: PDB Molecule: agmatine ureohydrolase;PDBTitle: the crystal structure of agmatine ureohydrolase of thermoplasma2 volcanium


Added to library: Sat Jan 22 08:43:37 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ASELRSIFSLKKIADAVNGYEEAKYVVFGIPFDNTSSYRRGSKYAPDSIRGAYVNLESYEYSYGIDLLAS
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP)
TT





TT

S
GGG
S


TT

S


GGGTTS
STTTTGGGS
 .........80.........90.........100.........110.........120.........130.........140
Sequence GXADLGDXEESEDVEYVIDTVESVVSAVXSDGKIPIXLGGEHSITVGAVRALPKDVDLVIVDAHSDFRSS
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP)




S
TT
SSGGGTT

SS
SB



S
 .........150.........160.........170.........180.........190.........200.........210
Sequence YXGNKYNHACVTRRALDLLGEGRITSIGIRSVSREEFEDPDFRKVSFISSFDVKKNGIDKYIEEVDRKSR
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP) BTTBTTSTTS
SSS
B

TSGGGGGS
S
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence RVYISVDXDGIDPAYAPAVGTPEPFGLADTDVRRLIERLSYKAVGFDIVEFSPLYDNGNTSXLAAKLLQV
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP) GGGB
TTT
TTBSS

SS
B
GGG
B
GGGSSS
 .........290
Sequence FIASREKYYK
Predicted secondary structure


SS confidence









Known secondary structure (DSSP) T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D