Fold library entry viewer: c2dkhA_

Added to library: Tue Mar 16 12:59:51 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	Q	F	H	L	N	G	F	R	P	G	N	P	L	I	A	P	A	S	P	L	A	P	A	H	T	E	A	V	P	S	Q	V	D	V	L	I	V	G	C	G	P	A	G	L	T	L	A	A	Q	L	A	A	F	P	D	I	R	T	C	I	V	E	Q	K	E	G	P	M	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	S				S		T	T	S					T	T	S					S	S			S										S											T	T		T	T	S							S	S	S	S			S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	G	Q	A	D	G	I	A	C	R	T	M	E	M	F	E	A	F	E	F	A	D	S	I	L	K	E	A	C	W	I	N	D	V	T	F	W	K	P	D	P	G	Q	P	G	R	I	A	R	H	G	R	V	Q	D	T	E	D	G	L	S	E	F	P	H	V	I	L	N	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		S															T	T									S													T	T	S	T	T										S	S		T	T	S		S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	R	V	H	D	H	Y	L	E	R	M	R	N	S	P	S	R	L	E	P	H	Y	A	R	R	V	L	D	V	K	V	D	H	G	A	A	D	Y	P	V	T	V	T	L	E	R	C	D	A	A	H	A	G	Q	I	E	T	V	Q	A	R	Y	V	V	G	C	D	G	A	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S	T	T					B		S										T	T		S	S											S	G	G	G	T	T																T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	S	N	V	R	R	A	I	G	R	Q	L	V	G	D	S	A	N	Q	A	W	G	V	M	D	V	L	A	V	T	D	F	P	D	V	R	Y	K	V	A	I	Q	S	E	Q	G	N	V	L	I	I	P	R	E	G	G	H	L	V	R	F	Y	V	E	M	D	N	I	T	V	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T							S		S															T	T	T	T	S							T	T									T	T	S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	Q	L	I	A	T	A	Q	R	V	L	H	P	Y	K	L	E	V	K	N	V	P	W	W	S	V	Y	E	I	G	Q	R	I	C	A	K	Y	D	D	V	V	D	A	V	A	T	P	D	S	P	L	P	R	V	F	I	A	G	D	A	C	H	T	H	S	P	K	A	G	Q	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T	S																					S		S	B	S				S	S			T	T	S									G	G	G	T					G	G	G			T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	M	N	F	S	M	Q	D	S	F	N	L	G	W	K	L	A	A	V	L	R	K	Q	C	A	P	E	L	L	H	T	Y	S	S	E	R	Q	V	V	A	Q	Q	L	I	D	F	D	R	E	W	A	K	D	P	K	E	F	Q	K	Y	F	E	Q	H	G	R	F	T	A	G	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T																			T	T	S	B		G	G	G	G																					S																			T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	G	T	H	Y	A	P	S	L	L	T	G	Q	A	K	H	Q	A	L	A	S	G	F	T	V	G	M	R	F	H	S	A	P	V	V	R	V	C	D	A	K	P	V	Q	L	G	H	C	G	K	A	D	G	R	W	R	L	Y	A	F	A	A	Q	N	D	L	A	Q	P	E	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S	S	S	S				T	T	G	G	G	B	T	T	S		T	T	S	B									T	T	T						G	G	G	G			S	S	S										T	T	T	T	T		T	T	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	G	L	L	A	L	C	R	F	L	E	G	D	A	A	S	P	L	R	R	F	T	P	A	G	Q	D	I	D	S	I	F	D	L	R	A	V	F	P	Q	A	Y	T	E	V	A	L	E	T	L	P	A	L	L	L	P	P	K	G	Q	L	G	M	I	D	Y	E	K	V	F	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T							S		T	T	S		T	T	S	S								S	S		G	G	G			G	G	G	S		G	G	G	S				T	T	T	T						S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.
Sequence	P	D	L	K	N	A	G	Q	D	I	F	E	L	R	G	I	D	R	Q	Q	G	A	L	V	V	V	R	P	D	Q	Y	V	A	Q	V	L	P	L	G	D	H	A	A	L	S	A	Y	F	E	S	F	M	R	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S	T	T							T	T	B		T	T	T								T	T	S	B							T	T											T	T	B

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PDB structure

FASTA sequence

Hidden Markov model

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