Fold library entry viewer: d1neka2

Added to library: Tue Mar 16 13:54:53 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	K	L	P	V	R	E	F	D	A	V	V	I	G	A	G	G	A	G	M	R	A	A	L	Q	I	S	Q	S	G	Q	T	C	A	L	L	S	K	V	F	P	T	R	S	H	T	V	S	A	Q	G	G	I	T	V	A	L	G	N	T	H	E	D	N	W	E	W	H	M	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S							S													T	T								S	S		G	G	G	S	G	G	G	G			S								S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	T	V	K	G	S	D	Y	I	G	D	Q	D	A	I	E	Y	M	C	K	T	G	P	E	A	I	L	E	L	E	H	M	G	L	P	F	S	R	L	D	D	G	R	I	Y	Q	R	P	F	G	G	Q	S	K	N	F	G	G	E	Q	A	A	R	T	A	A	A	A	D	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	S		S																						T	T					B		S		B	T	T	B				S	S	B						T	T	S	S	S							T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	G	H	A	L	L	H	T	L	Y	Q	Q	N	L	K	N	H	T	T	I	F	S	E	W	Y	A	L	D	L	V	K	N	Q	D	G	A	V	V	G	C	T	A	L	C	I	E	T	G	E	V	V	Y	F	K	A	R	A	T	V	L	A	T	G	G	A	G	R	I	Y	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	T						S										T	T	S										T	T	T									S										G	G	G	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	S	T	T	N	A	H	I	N	T	G	D	G	V	G	M	A	I	R	A	G	V	P	V	Q	D	M	M	G	G	I	P	T	K	V	T	G	Q	A	L	T	V	N	E	K	G	E	D	V	V	V	P	G	L	F	A	V	G	E	I	A	C	V	S	V	H	G	A	N	R	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		S	S		T	T		S									T	T	T				B					B			B		T	T								S	S	S												S	S	S				S	S	S	T	T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Sequence	G	G	N	S	L	L	D	L	V	V	F	G	R	A	A	G	L	H	L	Q	E	S	I	A	E	Q	G	A	L	R	D	A	S	E	S	D	V	E	A	S	L	D	R	L	N	R	W	N	N	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T																																							T

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PDB structure

FASTA sequence

Hidden Markov model

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