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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1yq4A_

Fold library idPDB HeaderMoleculeTitle
c1yq4A_PDB header: oxidoreductaseChain: A: PDB Molecule: succinate dehydrogenase flavoprotein subunit;PDBTitle: avian respiratory complex ii with 3-nitropropionate and2 ubiquinone


Added to library: Tue Mar 16 13:14:33 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ISTQYPVVDHEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEDDNWR
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Known secondary structure (DSSP)


SS

S

STT

SS
GGGSGGGG

S




SSS


 .........80.........90.........100.........110.........120.........130.........140
Sequence WHFYDTVKGSDWLGDQDAIHYMTEQAPAAVIELENYGMPFSRTEEGKIYQRAFGGQSLQFGKGGQAHRCC
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Known secondary structure (DSSP) TTT
S
TT



B
TTSSB


TT
BSGGGTS
B


 .........150.........160.........170.........180.........190.........200.........210
Sequence CVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYG
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Known secondary structure (DSSP)
STT
TTS

TTTTTTT
S




G
 .........220.........230.........240.........250.........260.........270.........280
Sequence RTYFSCTSAHTSTGDGTAMVTRAGLPCQDLEFVQFHPTGIYGAGCLITEGCRGEGGILINSQGERFMERY
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Known secondary structure (DSSP) GGSSSBSS
TT


T


TT
TTT

B

TTT

TTS

T
 .........290.........300.........310.........320.........330.........340.........350
Sequence APVAKDLASRDVVSRSMTIEIREGRGCGPEKDHVYLQLHHLPPQQLATRLPGISETAMIFAGVDVTKEPI
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Known secondary structure (DSSP) STTTGGGS
TTT
BTTTT
B
TTS




TTTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence PVLPTVHYNMGGIPTNYKGQVITHVNGEDKVVPGLYACGEAASASVHGANRLGANSLLDLVVFGRACALT
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Known secondary structure (DSSP) S
BB
TTSTT
GGG
SSSTTS

TTS
 .........430.........440.........450.........460.........470.........480.........490
Sequence IAETCKPGEPVPSIKPNAGEESVANLDKLRFADGTIRTSEARLNMQKTMQSHAAVFRTGSILQEGCEKLS
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Known secondary structure (DSSP)

TT






TTTT
BSSSSS
 .........500.........510.........520.........530.........540.........550.........560
Sequence QIYRDLAHLKTFDRGIVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKLRIDEFDYSKPL
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Known secondary structure (DSSP) GGGG




STT


S
BTTBTTB
S


SS
TTS

 .........570.........580.........590.........600.........610....
Sequence QGQQKRPFEEHWRKHTLSYVDVKSGKVTLKYRPVIDRTLNEEDCSSVPPAIRSY
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Known secondary structure (DSSP) TT




GGGS

TTTT




S
TTTS










Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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