Fold library entry viewer: d1jqoa_

Added to library: Tue Mar 16 14:19:18 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	I	E	Y	D	A	L	L	V	D	R	F	L	N	I	L	Q	D	L	H	G	P	S	L	R	E	F	V	Q	E	C	Y	E	V	S	A	D	Y	E	G	K	G	D	T	T	K	L	G	E	L	G	A	K	L	T	G	L	A	P	A	D	A	I	L	V	A	S	S	I	L	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																											T													S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	M	L	N	L	A	N	L	A	E	E	V	Q	I	A	H	R	R	R	N	S	D	I	E	E	T	L	K	R	L	V	S	E	V	G	K	S	P	E	E	V	F	E	A	L	K	N	Q	T	V	D	L	V	F	T	A	H	P	T	Q	S	A	R	R	S	L	L	Q	K	N	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																															T	T	S													T											T	T			S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	I	R	N	C	L	T	Q	L	N	A	K	D	I	T	D	D	D	K	Q	E	L	D	E	A	L	Q	R	E	I	Q	A	A	F	R	T	D	E	I	R	R	A	Q	P	T	P	Q	A	E	M	R	Y	G	M	S	Y	I	H	E	T	V	W	K	G	V	P	K	F	L	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T		T	T																							S			S			S																T	T	T	T	T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	R	V	D	T	A	L	K	N	I	G	I	N	E	R	L	P	Y	N	V	S	L	I	R	F	S	S	W	M	G	G	D	R	D	G	N	P	R	V	T	P	E	V	T	R	D	V	C	L	L	A	R	M	M	A	A	N	L	Y	I	D	Q	I	E	E	L	M	F	E	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	T			S				T	T			S							T	T	T	B		T	T		T	T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	M	W	R	C	N	D	E	L	R	V	R	A	E	E	L	H	S	S	S	G	S	K	V	T	K	Y	Y	I	E	F	W	K	Q	I	P	P	N	E	P	Y	R	V	I	L	G	H	V	R	D	K	L	Y	N	T	R	E	R	A	R	H	L	L	A	S	G	V	S	E	I	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																									T	T		S	S	S		S				T	T	S																										S	S			S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	A	E	S	S	F	T	S	I	E	E	F	L	E	P	L	E	L	C	Y	K	S	L	C	D	C	G	D	K	A	I	A	D	G	S	L	L	D	L	L	R	Q	V	F	T	F	G	L	S	L	V	K	L	D	I	R	Q	E	S	E	R	H	T	D	V	I	D	A	I	T	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	T	T	S			S																		T	S			T	T	T	T	T													T	T	S	S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	H	L	G	I	G	S	Y	R	E	W	P	E	D	K	R	Q	E	W	L	L	S	E	L	R	G	K	R	P	L	L	P	P	D	L	P	Q	T	D	E	I	A	D	V	I	G	A	F	H	V	L	A	E	L	P	P	D	S	F	G	P	Y	I	I	S	M	A	T	A	P	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	S			S	T	T	S																	S					T	T																				S		S	T	T							T	T			S	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	D	V	L	A	V	E	L	L	Q	R	E	C	G	V	R	Q	P	L	P	V	V	P	L	F	E	R	L	A	D	L	Q	S	A	P	A	S	V	E	R	L	F	S	V	D	W	Y	M	D	R	I	K	G	K	Q	Q	V	M	V	G	Y	S	D	S	G	K	D	A	G	R	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T			S	S										S						T										T									T	S								S	T	T					S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	S	A	A	W	Q	L	Y	R	A	Q	E	E	M	A	Q	V	A	K	R	Y	G	V	K	L	T	L	F	H	G	R	G	G	T	V	G	R	G	G	G	P	T	H	L	A	I	L	S	Q	P	P	D	T	I	N	G	S	I	R	V	T	V	Q	G	E	V	I	E	F	C	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			T	T	T											S	S	G	G	G	T										T	S		T	T	S		T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	G	E	E	H	L	C	F	Q	T	L	Q	R	F	T	A	A	T	L	E	H	G	M	H	P	P	V	S	P	K	P	E	W	R	K	L	M	D	E	M	A	V	V	A	T	E	E	Y	R	S	V	V	V	K	E	A	R	F	V	E	Y	F	R	S	A	T	P	E	T	E	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S																					S																													T	T		T	T									S			G	G	G
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	G	R	M	N	I	G	S	R	P	I	T	T	L	R	A	I	P	W	I	F	S	W	T	Q	T	R	F	H	L	P	V	W	L	G	V	G	A	A	F	K	F	A	I	D	K	D	V	R	N	F	Q	V	L	K	E	M	Y	N	E	W	P	F	F	R	V	T	L	D	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G			S					T	T			S										T	T							T	T													T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	E	M	V	F	A	K	G	D	P	G	I	A	G	L	Y	D	E	L	L	V	A	E	E	L	K	P	F	G	K	Q	L	R	D	K	Y	V	E	T	Q	Q	L	L	L	Q	I	A	G	H	K	D	I	L	E	G	D	P	F	L	K	Q	G	L	V	L	R	N	P	Y	I	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T													T	S		S	T	T																							T		S	S	T	T	S	S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.
Sequence	T	L	N	V	F	Q	A	Y	T	L	K	R	I	R	D	P	N	F	K	V	T	P	Q	P	P	L	S	K	E	A	G	L	V	K	L	N	P	A	S	E	Y	P	P	G	L	E	D	T	L	I	L	T	M	K	G	I	A	A	G	M	Q	N	T	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	T										S				T	T	T	T	T	S	S	S		S	S		T	T																	T

Download:

PDB structure

FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus Close JSmol Interactive 3D view in JSmol Phyre is now FREE for commercial users! All images and data generated by Phyre2 are free to use in any publication with acknowledgement Accessibility Statement Please cite: The Phyre2 web portal for protein modeling, prediction and analysis Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]   © Structural Bioinformatics Group, Imperial College, London Michael Sternberg   Disclaimer Terms and Conditions Phyre2 is part of Genome3D