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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2yg4B_

Fold library idPDB HeaderMoleculeTitle
c2yg4B_PDB header: oxidoreductaseChain: B: PDB Molecule: putrescine oxidase;PDBTitle: structure-based redesign of cofactor binding in putrescine2 oxidase: wild type bound to putrescine


Added to library: Sat May 21 09:31:20 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PTLQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTIDGAVLEIGGQWVSPDQTALISL
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Known secondary structure (DSSP)


STT


SSSSS
TT

TT
S


B
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence LDELGLKTFERYREGESVYISSAGERTRYTGDSFPTNETTKKEMDRLIDEMDDLAAQIGAEEPWAHPLAR
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Known secondary structure (DSSP) TT





S
TT


SSS




SS
GGGSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence DLDTVSFKQWLINQSDDAEARDNIGLFIAGGMLTKPAHSFSALQAVLMAASAGSFSHLVDEDFILDKRVI
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Known secondary structure (DSSP) TSB
S






S
TTSSBTT

T
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence GGMQQVSIRMAEALGDDVFLNAPVRTVKWNESGATVLADGDIRVEASRVILAVPPNLYSRISYDPPLPRR
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Known secondary structure (DSSP) T
TGGG
S

TTTTT
S
GGGGGGSS


 .........290.........300.........310.........320.........330.........340.........350
Sequence QHQMHQHQSLGLVIKVHAVYETPFWREDGLSGTGFGASEVVQEVYDNTNHEDDRGTLVAFVSDEKADAMF
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Known secondary structure (DSSP) T

SS
GGGGGT
TTSSS



TT
SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence ELSAEERKATILASLARYLGPKAEEPVVYYESDWGSEEWTRGAYAASFDLGGLHRYGADSRTPVGPIHFS
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Known secondary structure (DSSP) TS

GGGG

S
GGG
TTT
SSS

TTGGGSS

BTT
 .........430.........440.........450
Sequence CSDIAAEGYQHVDGAVRMGQRTAADIIARS
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Known secondary structure (DSSP)
GGG
STTTTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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