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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3cpiH_

Fold library idPDB HeaderMoleculeTitle
c3cpiH_PDB header: protein transportChain: H: PDB Molecule: rab gdp-dissociation inhibitor;PDBTitle: crystal structure of yeast rab-gdi


Added to library: Tue Mar 16 12:28:03 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TIDTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVTLSQLYEKFKQNPISKEERESKF
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Known secondary structure (DSSP)



B
S

STT


SSSSS
TTS


SS


T
 .........80.........90.........100.........110.........120.........130.........140
Sequence GKDRDWNVDLIPKFLMANGELTNILIHTDVTRYVDFKQVSGSYVFKQGKIYKVPANEIEAISSPLMGIFE
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Known secondary structure (DSSP)

GGG

SS

BTTSTGGGS


STT


S
TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence KRRMKKFLEWISSYKEDDLSTHQGLDLDKNTMDEVYYKFGLGNSTKEFIGHAMALWTNDDYLQQPARPSF
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Known secondary structure (DSSP)
BTTBGGGGTT

TTTSBT

TS

SSSGGGGSB
 .........220.........230.........240.........250.........260.........270.........280
Sequence ERILLYCQSVARYGKSPYLYPMYGLGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKTKLGT
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Known secondary structure (DSSP) SS
STT
TTTT

S




TTT

TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence FKAPLVIADPTYFPEKCKSTGQRVIRAICILNHPVPNTSNADSLQIIIPQSQLGRKSDIYVAIVSDAHNV
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Known secondary structure (DSSP)
S
GGG
GGGSS

TTSTT
SS
GGGTT
SS
GGGTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence CSKGHYLAIISTIIETDKPHIELEPAFKLLGPIEEKFMGIAELFEPREDGSKDNIYLSRSYDASSHFESM
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Known secondary structure (DSSP) S
TT


SS
TTT
S
SSS
STTTT




S
SBS
 .........430.........
Sequence TDDVKDIYFRVTGHPLVLK
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Known secondary structure (DSSP) SS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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