PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3mpoD_

Fold library id	PDB Header	Molecule	Title
c3mpoD_	PDB header: hydrolase	Chain: D: PDB Molecule: predicted hydrolase of the had superfamily;	PDBTitle: the crystal structure of a hydrolase from lactobacillus brevis

Links to external resources
Added to library: Sat Aug 28 17:36:42 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence T I K L I A I D I D G T L Q A T I D A V Q A A K A Q G I K V V L C T G R P L T G V Q P Y L D A X D I D G D D Q Y A I T F N G S V A Q T I S G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T T T
T T T T
S S
G G G T T T
S S S
G G G T T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence K V L T N H S L T Y E D Y I D L E A W A R K V R A H F Q I E T P D Y I Y T A N K D I S A Y T I A E S Y L V R X L I Q Y R E V S E T P R D L T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
S S
S S
T
G G G S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence I S K A X F V D Y P Q V I E Q V K A N X P Q D F K D R F S V V Q S A P Y F I E V X N R R A S K G G T L S E L V D Q L G L T A D D V X T L G N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T
T T
G G G
T

. . . . . . . . . 220 . . . . . . . . . 230 . . .

Sequence D L T X I K Y A G L G V A X G N A I D E V K E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S T
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	I	K	L	I	A	I	D	I	D	G	T	L	Q	A	T	I	D	A	V	Q	A	A	K	A	Q	G	I	K	V	V	L	C	T	G	R	P	L	T	G	V	Q	P	Y	L	D	A	X	D	I	D	G	D	D	Q	Y	A	I	T	F	N	G	S	V	A	Q	T	I	S	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S						T	T	T	T			T	T										T	T								S	S		G	G	G	T							T	T			S	S	S						G	G	G	T					T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	V	L	T	N	H	S	L	T	Y	E	D	Y	I	D	L	E	A	W	A	R	K	V	R	A	H	F	Q	I	E	T	P	D	Y	I	Y	T	A	N	K	D	I	S	A	Y	T	I	A	E	S	Y	L	V	R	X	L	I	Q	Y	R	E	V	S	E	T	P	R	D	L	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																								T								S	S							S	S													T								G	G	G	S		T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	S	K	A	X	F	V	D	Y	P	Q	V	I	E	Q	V	K	A	N	X	P	Q	D	F	K	D	R	F	S	V	V	Q	S	A	P	Y	F	I	E	V	X	N	R	R	A	S	K	G	G	T	L	S	E	L	V	D	Q	L	G	L	T	A	D	D	V	X	T	L	G	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																			T	T							T	T														T	T			G	G	G						T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Sequence	D	L	T	X	I	K	Y	A	G	L	G	V	A	X	G	N	A	I	D	E	V	K	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T							S	T						T	T