Email l.a.kelley@imperial.ac.uk Description P71244 Date Thu Jan 5 12:12:40 GMT 2012 Unique Job ID b78bc694cdd6e33b

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3jurA_ 98.5 14 PDB header:hydrolase Chain: A: PDB Molecule:exo-poly-alpha-d-galacturonosidase; PDBTitle: the crystal structure of a hyperthermoactive exopolygalacturonase from2 thermotoga maritima 2 c2uveA_ 98.1 21 PDB header:hydrolase Chain: A: PDB Molecule:exopolygalacturonase; PDBTitle: structure of yersinia enterocolitica family 282 exopolygalacturonase 3 d1bhea_ 97.8 17 Fold:Single-stranded right-handed beta-helix Superfamily:Pectin lyase-like Family:Galacturonase 4 d1rmga_ 97.1 16 Fold:Single-stranded right-handed beta-helix Superfamily:Pectin lyase-like Family:Galacturonase 5 c3gqnA_ 96.5 19 PDB header:viral protein Chain: A: PDB Molecule:preneck appendage protein; PDBTitle: crystal structure of the pre-mature bacteriophage phi29 gene product2 12 6 d1k5ca_ 96.3 17 Fold:Single-stranded right-handed beta-helix Superfamily:Pectin lyase-like Family:Galacturonase 7 c3eqnB_ 95.9 22 PDB header:hydrolase Chain: B: PDB Molecule:glucan 1,3-beta-glucosidase; PDBTitle: crystal structure of beta-1,3-glucanase from phanerochaete2 chrysosporium (lam55a) 8 c2iq7D_ 95.8 18 PDB header:hydrolase Chain: D: PDB Molecule:endopolygalacturonase; PDBTitle: crystal structure of the polygalacturonase from colletotrichum lupini2 and its implications for the interaction with polygalacturonase-3 inhibiting proteins 9 c1czfB_ 95.6 21 PDB header:hydrolase Chain: B: PDB Molecule:polygalacturonase ii; PDBTitle: endo-polygalacturonase ii from aspergillus niger 10 d1czfa_ 95.6 21 Fold:Single-stranded right-handed beta-helix Superfamily:Pectin lyase-like Family:Galacturonase 11 c3gq8A_ 95.6 24 PDB header:viral protein Chain: A: PDB Molecule:preneck appendage protein; PDBTitle: crystal structure of the bacteriophage phi29 gene product2 12 n-terminal fragment in complex with 2-(n-3 cyclohexylamino)ethane sulfonic acid (ches) 12 d1ia5a_ 95.5 21 Fold:Single-stranded right-handed beta-helix Superfamily:Pectin lyase-like Family:Galacturonase 13 c2z8gB_ 91.7 21 PDB header:hydrolase Chain: B: PDB Molecule:isopullulanase; PDBTitle: aspergillus niger atcc9642 isopullulanase complexed with isopanose 14 d1nhca_ 81.0 18 Fold:Single-stranded right-handed beta-helix Superfamily:Pectin lyase-like Family:Galacturonase 15 d1hg8a_ 79.0 21 Fold:Single-stranded right-handed beta-helix Superfamily:Pectin lyase-like Family:Galacturonase 16 d1ogmx2 71.6 19 Fold:Single-stranded right-handed beta-helix Superfamily:Pectin lyase-like Family:Dextranase, catalytic domain 17 d1hf2a1 55.1 41 Fold:Single-stranded right-handed beta-helix Superfamily:Cell-division inhibitor MinC, C-terminal domain Family:Cell-division inhibitor MinC, C-terminal domain 18 c1hf2A_ 53.4 41 PDB header:cell division protein Chain: A: PDB Molecule:septum site-determining protein minc; PDBTitle: crystal structure of the bacterial cell-division inhibitor2 minc from t. maritima 19 c1dbgA_ 52.2 14 PDB header:lyase Chain: A: PDB Molecule:chondroitinase b; PDBTitle: crystal structure of chondroitinase b 20 d1o88a_ 51.5 17 Fold:Single-stranded right-handed beta-helix Superfamily:Pectin lyase-like Family:Pectate lyase-like 21 d1pcla_ not modelled 46.7 12 Fold:Single-stranded right-handed beta-helix Superfamily:Pectin lyase-like Family:Pectate lyase-like 22 d1xqma_ not modelled 46.5 30 Fold:GFP-like Superfamily:GFP-like Family:Fluorescent proteins 23 c1ogoX_ not modelled 44.9 20 PDB header:hydrolase Chain: X: PDB Molecule:dextranase; PDBTitle: dex49a from penicillium minioluteum complex with isomaltose 24 c3mezA_ not modelled 44.5 20 PDB header:sugar binding protein Chain: A: PDB Molecule:mannose-specific lectin 3 chain 1; PDBTitle: x-ray structural analysis of a mannose specific lectin from dutch2 crocus (crocus vernus) 25 c2xvsA_ not modelled 43.6 19 PDB header:antitumor protein Chain: A: PDB Molecule:tetratricopeptide repeat protein 5; PDBTitle: crystal structure of human ttc5 (strap) c-terminal ob2 domain 26 d2f2ha1 not modelled 38.8 28 Fold:Putative glucosidase YicI, C-terminal domain Superfamily:Putative glucosidase YicI, C-terminal domain Family:Putative glucosidase YicI, C-terminal domain 27 d1bn8a_ not modelled 38.6 22 Fold:Single-stranded right-handed beta-helix Superfamily:Pectin lyase-like Family:Pectate lyase-like 28 c2pyhB_ not modelled 37.8 19 PDB header:isomerase Chain: B: PDB Molecule:poly(beta-d-mannuronate) c5 epimerase 4; PDBTitle: azotobacter vinelandii mannuronan c-5 epimerase alge4 a-module2 complexed with mannuronan trisaccharide 29 d1j3pa_ not modelled 33.3 22 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Glucose-6-phosphate isomerase, GPI 30 c1nkgA_ not modelled 30.2 30 PDB header:lyase Chain: A: PDB Molecule:rhamnogalacturonase b; PDBTitle: rhamnogalacturonan lyase from aspergillus aculeatus 31 d1idka_ not modelled 29.8 21 Fold:Single-stranded right-handed beta-helix Superfamily:Pectin lyase-like Family:Pectin lyase 32 c2dd9C_ not modelled 29.2 20 PDB header:luminescent protein Chain: C: PDB Molecule:green fluorescent protein; PDBTitle: a mutant of gfp-like protein from chiridius poppei 33 d2qqra1 not modelled 28.6 37 Fold:SH3-like barrel Superfamily:Tudor/PWWP/MBT Family:Tudor domain 34 c1vblA_ not modelled 26.2 19 PDB header:lyase Chain: A: PDB Molecule:pectate lyase 47; PDBTitle: structure of the thermostable pectate lyase pl 47 35 c2qy1B_ not modelled 26.1 14 PDB header:lyase Chain: B: PDB Molecule:pectate lyase ii; PDBTitle: pectate lyase a31g/r236f from xanthomonas campestris 36 c2dpfB_ not modelled 25.6 25 PDB header:plant protein Chain: B: PDB Molecule:curculin; PDBTitle: crystal structure of curculin1 homodimer 37 c3rrrB_ not modelled 25.3 32 PDB header:viral protein Chain: B: PDB Molecule:fusion glycoprotein f0; PDBTitle: structure of the rsv f protein in the post-fusion conformation 38 d1bwud_ not modelled 25.0 13 Fold:beta-Prism II Superfamily:alpha-D-mannose-specific plant lectins Family:alpha-D-mannose-specific plant lectins 39 c3jyvT_ not modelled 24.8 23 PDB header:ribosome Chain: T: PDB Molecule:s19e protein; PDBTitle: structure of the 40s rrna and proteins and p/e trna for eukaryotic2 ribosome based on cryo-em map of thermomyces lanuginosus ribosome at3 8.9a resolution 40 d1x82a_ not modelled 24.7 23 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Glucose-6-phosphate isomerase, GPI 41 c3r0eC_ not modelled 23.3 33 PDB header:sugar binding protein Chain: C: PDB Molecule:lectin; PDBTitle: structure of remusatia vivipara lectin 42 d1s0ua2 not modelled 21.3 78 Fold:Elongation factor/aminomethyltransferase common domain Superfamily:EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain Family:EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 43 c3rkiB_ not modelled 21.0 32 PDB header:viral protein Chain: B: PDB Molecule:fusion glycoprotein f0; PDBTitle: structural basis for immunization with post-fusion rsv f to elicit2 high neutralizing antibody titers 44 c3u5ga_ not modelled 19.6 33 PDB header:ribosome Chain: A: PDB Molecule:40s ribosomal protein s0-a; PDBTitle: the structure of the eukaryotic ribosome at 3.0 a resolution 45 c3cfhB_ not modelled 19.5 31 PDB header:fluorescent protein Chain: B: PDB Molecule:gfp-like photoswitchable fluorescent protein; PDBTitle: photoswitchable red fluorescent protein psrfp, off-state 46 d1jpca_ not modelled 19.5 23 Fold:beta-Prism II Superfamily:alpha-D-mannose-specific plant lectins Family:alpha-D-mannose-specific plant lectins 47 d1npla_ not modelled 19.0 28 Fold:beta-Prism II Superfamily:alpha-D-mannose-specific plant lectins Family:alpha-D-mannose-specific plant lectins 48 d1pxza_ not modelled 18.7 12 Fold:Single-stranded right-handed beta-helix Superfamily:Pectin lyase-like Family:Pectate lyase-like 49 c2xzn5_ not modelled 17.9 28 PDB header:ribosome Chain: 5: PDB Molecule:ribosomal protein s26e containing protein; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2 50 c3lasA_ not modelled 17.2 31 PDB header:lyase Chain: A: PDB Molecule:putative carbonic anhydrase; PDBTitle: crystal structure of carbonic anhydrase from streptococcus mutans to2 1.4 angstrom resolution 51 c3nezB_ not modelled 16.8 23 PDB header:fluorescent protein Chain: B: PDB Molecule:mrojoa; PDBTitle: mrojoa 52 c3kv4A_ not modelled 16.6 42 PDB header:h3k4me3 binding protein, transferase Chain: A: PDB Molecule:phd finger protein 8; PDBTitle: structure of phf8 in complex with histone h3 53 c1z8rA_ not modelled 15.8 50 PDB header:hydrolase Chain: A: PDB Molecule:coxsackievirus b4 polyprotein; PDBTitle: 2a cysteine proteinase from human coxsackievirus b4 (strain2 jvb / benschoten / new york / 51) 54 d1xd5a_ not modelled 15.7 25 Fold:beta-Prism II Superfamily:alpha-D-mannose-specific plant lectins Family:alpha-D-mannose-specific plant lectins 55 c3iz6S_ not modelled 15.6 16 PDB header:ribosome Chain: S: PDB Molecule:40s ribosomal protein s19 (s19e); PDBTitle: localization of the small subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome 56 c3mezB_ not modelled 15.1 10 PDB header:sugar binding protein Chain: B: PDB Molecule:mannose-specific lectin 3 chain 2; PDBTitle: x-ray structural analysis of a mannose specific lectin from dutch2 crocus (crocus vernus) 57 d1o12a1 not modelled 15.1 17 Fold:Composite domain of metallo-dependent hydrolases Superfamily:Composite domain of metallo-dependent hydrolases Family:N-acetylglucosamine-6-phosphate deacetylase, NagA 58 d2hv2a1 not modelled 14.6 19 Fold:SCP-like Superfamily:SCP-like Family:EF1021 C-terminal domain-like 59 d2hrva_ not modelled 14.4 33 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Viral cysteine protease of trypsin fold 60 c2nlwA_ not modelled 14.4 16 PDB header:translation Chain: A: PDB Molecule:eukaryotic translation initiation factor 3 PDBTitle: solution structure of the rrm domain of human eukaryotic2 initiation factor 3b 61 d2c5lc1 not modelled 13.9 43 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ras-binding domain, RBD 62 c2wulB_ not modelled 13.9 27 PDB header:oxidoreductase Chain: B: PDB Molecule:glutaredoxin related protein 5; PDBTitle: crystal structure of the human glutaredoxin 5 with bound2 glutathione in an fes cluster 63 c3a0cA_ not modelled 13.8 19 PDB header:sugar binding protein Chain: A: PDB Molecule:mannose/sialic acid-binding lectin; PDBTitle: crystal structure of an anti-hiv mannose-binding lectin from2 polygonatum cyrtonema hua 64 c3grhA_ not modelled 13.6 17 PDB header:hydrolase Chain: A: PDB Molecule:acyl-coa thioester hydrolase ybgc; PDBTitle: crystal structure of escherichia coli ybhc 65 d2v7fa1 not modelled 13.2 14 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Rps19E-like 66 c3b08H_ not modelled 13.1 43 PDB header:signaling protein/metal binding protein Chain: H: PDB Molecule:ranbp-type and c3hc4-type zinc finger-containing protein 1; PDBTitle: crystal structure of the mouse hoil1-l-nzf in complex with linear di-2 ubiquitin 67 c3ipzA_ not modelled 12.9 40 PDB header:electron transport, oxidoreductase Chain: A: PDB Molecule:monothiol glutaredoxin-s14, chloroplastic; PDBTitle: crystal structure of arabidopsis monothiol glutaredoxin atgrxcp 68 c2e7pC_ not modelled 12.7 47 PDB header:electron transport Chain: C: PDB Molecule:glutaredoxin; PDBTitle: crystal structure of the holo form of glutaredoxin c1 from populus2 tremula x tremuloides 69 d1jnya2 not modelled 12.6 19 Fold:Elongation factor/aminomethyltransferase common domain Superfamily:EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain Family:EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 70 c3hz7A_ not modelled 12.5 50 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of the sira-like protein (dsy4693) from2 desulfitobacterium hafniense, northeast structural genomics3 consortium target dhr2a 71 c2z6zA_ not modelled 12.4 26 PDB header:fluorescent protein Chain: A: PDB Molecule:fluorescent protein dronpa; PDBTitle: crystal structure of a photoswitchable gfp-like protein2 dronpa in the bright-state 72 c3l4nA_ not modelled 12.4 27 PDB header:oxidoreductase Chain: A: PDB Molecule:monothiol glutaredoxin-6; PDBTitle: crystal structure of yeast monothiol glutaredoxin grx6 73 c2jacA_ not modelled 11.7 47 PDB header:electron transport Chain: A: PDB Molecule:glutaredoxin-1; PDBTitle: glutaredoxin grx1p c30s mutant from yeast 74 c3c1sA_ not modelled 10.9 50 PDB header:oxidoreductase Chain: A: PDB Molecule:glutaredoxin-1; PDBTitle: crystal structure of grx1 in glutathionylated form 75 d1moua_ not modelled 10.9 23 Fold:GFP-like Superfamily:GFP-like Family:Fluorescent proteins 76 d1jhba_ not modelled 10.7 27 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase 77 d1kj1d_ not modelled 10.6 14 Fold:beta-Prism II Superfamily:alpha-D-mannose-specific plant lectins Family:alpha-D-mannose-specific plant lectins 78 c3r0eD_ not modelled 10.6 20 PDB header:sugar binding protein Chain: D: PDB Molecule:lectin; PDBTitle: structure of remusatia vivipara lectin 79 d1nkga3 not modelled 10.1 20 Fold:Supersandwich Superfamily:Galactose mutarotase-like Family:Rhamnogalacturonase B, RhgB, N-terminal domain 80 c3pu3A_ not modelled 9.9 45 PDB header:protein binding Chain: A: PDB Molecule:phd finger protein 2; PDBTitle: phf2 jumonji domain-nog complex 81 c3k3nA_ not modelled 9.8 50 PDB header:oxidoreductase Chain: A: PDB Molecule:phd finger protein 8; PDBTitle: crystal structure of the catalytic core domain of human phf8 82 d1ggxa_ not modelled 9.8 27 Fold:GFP-like Superfamily:GFP-like Family:Fluorescent proteins 83 c2gw4D_ not modelled 9.8 23 PDB header:luminescent protein Chain: D: PDB Molecule:kaede; PDBTitle: crystal structure of stony coral fluorescent protein kaede, red form 84 c2w3nA_ not modelled 9.7 31 PDB header:lyase Chain: A: PDB Molecule:carbonic anhydrase 2; PDBTitle: structure and inhibition of the co2-sensing carbonic2 anhydrase can2 from the pathogenic fungus cryptococcus3 neoformans 85 d1ktea_ not modelled 9.7 27 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase 86 d2rkya1 not modelled 9.7 57 Fold:FnI-like domain Superfamily:FnI-like domain Family:Fibronectin type I module 87 d1bwua_ not modelled 9.6 17 Fold:beta-Prism II Superfamily:alpha-D-mannose-specific plant lectins Family:alpha-D-mannose-specific plant lectins 88 d1jdqa_ not modelled 9.4 50 Fold:IF3-like Superfamily:SirA-like Family:SirA-like 89 c3gztF_ not modelled 9.3 86 PDB header:virus Chain: F: PDB Molecule:outer capsid glycoprotein vp7; PDBTitle: vp7 recoated rotavirus dlp 90 d2naca2 not modelled 9.3 20 Fold:Flavodoxin-like Superfamily:Formate/glycerate dehydrogenase catalytic domain-like Family:Formate/glycerate dehydrogenases, substrate-binding domain 91 d1lbqa_ not modelled 9.3 29 Fold:Chelatase-like Superfamily:Chelatase Family:Ferrochelatase 92 d1xd6a_ not modelled 9.2 30 Fold:beta-Prism II Superfamily:alpha-D-mannose-specific plant lectins Family:alpha-D-mannose-specific plant lectins 93 c1ylkA_ not modelled 9.2 25 PDB header:unknown function Chain: A: PDB Molecule:hypothetical protein rv1284/mt1322; PDBTitle: crystal structure of rv1284 from mycobacterium tuberculosis in complex2 with thiocyanate 94 d2cg7a1 not modelled 9.1 57 Fold:FnI-like domain Superfamily:FnI-like domain Family:Fibronectin type I module 95 c2zo7A_ not modelled 9.0 24 PDB header:luminescent protein Chain: A: PDB Molecule:cyan/green-emitting gfp-like protein, kusabira-cyan mutant PDBTitle: crystal structure of a kusabira-cyan mutant (kcy-r1), a cyan/green-2 emitting gfp-like protein 96 c2hzfA_ not modelled 8.9 27 PDB header:electron transport, oxidoreductase Chain: A: PDB Molecule:glutaredoxin-1; PDBTitle: crystal structures of a poxviral glutaredoxin in the oxidized and2 reduced states show redox-correlated structural changes 97 d2rkya2 not modelled 8.9 71 Fold:FnI-like domain Superfamily:FnI-like domain Family:Fibronectin type I module 98 c2eceA_ not modelled 8.7 25 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:462aa long hypothetical selenium-binding protein; PDBTitle: x-ray structure of hypothetical selenium-binding protein2 from sulfolobus tokodaii, st0059 99 c2ddcA_ not modelled 8.6 34 PDB header:luminescent protein Chain: A: PDB Molecule:photoconvertible fluorescent protein; PDBTitle: unique behavior of a histidine responsible for an2 engineered green-to-red photoconversion process