PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c2xzn5_

Fold library id	PDB Header	Molecule	Title
c2xzn5_	PDB header: ribosome	Chain: 5: PDB Molecule: ribosomal protein s26e containing protein;	PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2

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Added to library: Sat Jan 22 08:43:21 2011

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence P V K R R N A G R S Q K N R G H T R T V P C T N C G R Q V A K D K A V K R Y T V R D M V D P S S K R D I Q Q K L A F E N E K Q G I P K L Y V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T T
S S S
T T T
T T T S
S S
S
S
S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . .

Sequence K L Q Y C I S C A I H S R V V R V R C A E D R R I R R P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S S
T G G G G

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	V	K	R	R	N	A	G	R	S	Q	K	N	R	G	H	T	R	T	V	P	C	T	N	C	G	R	Q	V	A	K	D	K	A	V	K	R	Y	T	V	R	D	M	V	D	P	S	S	K	R	D	I	Q	Q	K	L	A	F	E	N	E	K	Q	G	I	P	K	L	Y	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S	T	T					S	S	S								T	T	T						T	T	T	S									S	S											S			S				S			S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Sequence	K	L	Q	Y	C	I	S	C	A	I	H	S	R	V	V	R	V	R	C	A	E	D	R	R	I	R	R	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T	S	S					T	G	G	G	G