PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2dd9C_

Fold library id	PDB Header	Molecule	Title
c2dd9C_	PDB header: luminescent protein	Chain: C: PDB Molecule: green fluorescent protein;	PDBTitle: a mutant of gfp-like protein from chiridius poppei

Links to external resources
Added to library: Tue Mar 16 14:23:42 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence T T F K I E S R I H G N L N G E K F E L V G G G V G E E G R L E I E M K T K D K P L A F S P F L L S T C M F Y H F A S F P K G T K N I Y L H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T S S S
S S
G G G G T T T
G G G
T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A A T N G G Y T N T R K E I Y E D G G I L E V N F R Y T Y E F N K I I G D V E C I G H G F P S Q S P I F K D T I V K S C P T V D L M L P M S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T S
T T
T T S G G G T T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence G N I I A S S Y A R A F Q L K D G S F Y T A E V K N N I D F K N P I H E S F S K S G P M F T H R R V E E T H T K E N L A M V E Y Q Q V F N S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S T T S
S S
T T S
S S S
S S S S

. . .

Sequence A P R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	T	F	K	I	E	S	R	I	H	G	N	L	N	G	E	K	F	E	L	V	G	G	G	V	G	E	E	G	R	L	E	I	E	M	K	T	K	D	K	P	L	A	F	S	P	F	L	L	S	T	C	M	F	Y	H	F	A	S	F	P	K	G	T	K	N	I	Y	L	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T													T	T									S	S	S			S	S		G	G	G	G	T	T	T			G	G	G					T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	A	T	N	G	G	Y	T	N	T	R	K	E	I	Y	E	D	G	G	I	L	E	V	N	F	R	Y	T	Y	E	F	N	K	I	I	G	D	V	E	C	I	G	H	G	F	P	S	Q	S	P	I	F	K	D	T	I	V	K	S	C	P	T	V	D	L	M	L	P	M	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T											T	T	S													T	T															T	T	S	G	G	G	T	T																S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	N	I	I	A	S	S	Y	A	R	A	F	Q	L	K	D	G	S	F	Y	T	A	E	V	K	N	N	I	D	F	K	N	P	I	H	E	S	F	S	K	S	G	P	M	F	T	H	R	R	V	E	E	T	H	T	K	E	N	L	A	M	V	E	Y	Q	Q	V	F	N	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S													T	T	S														S	S				T	T	S		S	S	S														S	S												S	S
	.	.	.
Sequence	A	P	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)