Email l.a.kelley@imperial.ac.uk Description P33352 Date Thu Jan 5 11:51:53 GMT 2012 Unique Job ID 468308c3913ebbf7

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2nvoA_ 99.7 14 PDB header:rna binding protein Chain: A: PDB Molecule:ro sixty-related protein, rsr; PDBTitle: crystal structure of deinococcus radiodurans ro (rsr) protein 2 c3ibsA_ 99.7 16 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved hypothetical protein batb; PDBTitle: crystal structure of conserved hypothetical protein batb from2 bacteroides thetaiotaomicron 3 c2x5nA_ 99.6 11 PDB header:nuclear protein Chain: A: PDB Molecule:26s proteasome regulatory subunit rpn10; PDBTitle: crystal structure of the sprpn10 vwa domain 4 c2i6sA_ 99.6 18 PDB header:hydrolase Chain: A: PDB Molecule:complement c2a fragment; PDBTitle: complement component c2a 5 c1rs0A_ 99.6 19 PDB header:hydrolase Chain: A: PDB Molecule:complement factor b; PDBTitle: crystal structure analysis of the bb segment of factor b2 complexed with di-isopropyl-phosphate (dip) 6 c2x31F_ 99.6 19 PDB header:ligase Chain: F: PDB Molecule:magnesium-chelatase 60 kda subunit; PDBTitle: modelling of the complex between subunits bchi and bchd of magnesium2 chelatase based on single-particle cryo-em reconstruction at 7.5 ang 7 c2ok5A_ 99.6 19 PDB header:hydrolase Chain: A: PDB Molecule:complement factor b; PDBTitle: human complement factor b 8 d1jeyb2 99.5 22 Fold:vWA-like Superfamily:vWA-like Family:Ku80 subunit N-terminal domain 9 d2ok5a1 99.5 19 Fold:vWA-like Superfamily:vWA-like Family:Integrin A (or I) domain 10 d1yvra2 99.5 20 Fold:vWA-like Superfamily:vWA-like Family:RoRNP C-terminal domain-like 11 c1yvrA_ 99.5 15 PDB header:rna binding protein Chain: A: PDB Molecule:60-kda ss-a/ro ribonucleoprotein; PDBTitle: ro autoantigen 12 d1jeya2 99.5 21 Fold:vWA-like Superfamily:vWA-like Family:Ku70 subunit N-terminal domain 13 d1shux_ 99.4 18 Fold:vWA-like Superfamily:vWA-like Family:Integrin A (or I) domain 14 c2b2xB_ 99.3 15 PDB header:immune system Chain: B: PDB Molecule:integrin alpha-1; PDBTitle: vla1 rdeltah i-domain complexed with a quadruple mutant of the aqc22 fab 15 c2iueA_ 99.3 21 PDB header:membrane protein Chain: A: PDB Molecule:pactolus i-domain; PDBTitle: pactolus i-domain: functional switching of the rossmann2 fold 16 c2xggB_ 99.3 19 PDB header:hydrolase Chain: B: PDB Molecule:microneme protein 2; PDBTitle: structure of toxoplasma gondii micronemal protein 2 a_i2 domain 17 d1pd0a3 99.3 22 Fold:vWA-like Superfamily:vWA-like Family:Trunk domain of Sec23/24 18 c3n2nC_ 99.3 18 PDB header:toxin receptor Chain: C: PDB Molecule:anthrax toxin receptor 1; PDBTitle: the crystal structure of tumor endothelial marker 8 (tem8)2 extracellular domain 19 d1u0oc1 99.2 15 Fold:vWA-like Superfamily:vWA-like Family:Integrin A (or I) domain 20 d1ijba_ 99.2 13 Fold:vWA-like Superfamily:vWA-like Family:Integrin A (or I) domain 21 d1atza_ not modelled 99.1 16 Fold:vWA-like Superfamily:vWA-like Family:Integrin A (or I) domain 22 c3gxbB_ not modelled 99.1 13 PDB header:cell adhesion Chain: B: PDB Molecule:von willebrand factor; PDBTitle: crystal structure of vwf a2 domain 23 c1jeyB_ not modelled 99.1 17 PDB header:dna binding protein/dna Chain: B: PDB Molecule:ku80; PDBTitle: crystal structure of the ku heterodimer bound to dna 24 d1v7pc_ not modelled 99.1 18 Fold:vWA-like Superfamily:vWA-like Family:Integrin A (or I) domain 25 d1n3ya_ not modelled 99.1 14 Fold:vWA-like Superfamily:vWA-like Family:Integrin A (or I) domain 26 d1ck4a_ not modelled 99.1 17 Fold:vWA-like Superfamily:vWA-like Family:Integrin A (or I) domain 27 d1q0pa_ not modelled 99.1 21 Fold:vWA-like Superfamily:vWA-like Family:Integrin A (or I) domain 28 d1pt6a_ not modelled 98.9 16 Fold:vWA-like Superfamily:vWA-like Family:Integrin A (or I) domain 29 d1mf7a_ not modelled 98.9 13 Fold:vWA-like Superfamily:vWA-like Family:Integrin A (or I) domain 30 d1tyeb2 not modelled 98.9 21 Fold:vWA-like Superfamily:vWA-like Family:Integrin A (or I) domain 31 d1mjna_ not modelled 98.6 19 Fold:vWA-like Superfamily:vWA-like Family:Integrin A (or I) domain 32 c3fcuB_ not modelled 98.6 21 PDB header:cell adhesion/blood clotting Chain: B: PDB Molecule:integrin beta-3; PDBTitle: structure of headpiece of integrin aiibb3 in open conformation 33 c3ragA_ not modelled 98.5 17 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of uncharacterized protein aaci_0196 from2 alicyclobacillus acidocaldarius subsp. acidocaldarius dsm 446 34 c1u8cB_ not modelled 98.4 22 PDB header:cell adhesion Chain: B: PDB Molecule:integrin beta-3; PDBTitle: a novel adaptation of the integrin psi domain revealed from its2 crystal structure 35 c1jeqA_ not modelled 98.2 18 PDB header:dna binding protein Chain: A: PDB Molecule:ku70; PDBTitle: crystal structure of the ku heterodimer 36 c1pd0A_ not modelled 98.0 23 PDB header:transport protein Chain: A: PDB Molecule:protein transport protein sec24; PDBTitle: crystal structure of the copii coat subunit, sec24,2 complexed with a peptide from the snare protein sed53 (yeast syntaxin-5) 37 c3k6sB_ not modelled 97.8 19 PDB header:cell adhesion Chain: B: PDB Molecule:integrin beta-2; PDBTitle: structure of integrin alphaxbeta2 ectodomain 38 c1m2vB_ not modelled 97.6 26 PDB header:protein transport Chain: B: PDB Molecule:protein transport protein sec24; PDBTitle: crystal structure of the yeast sec23/24 heterodimer 39 c3eh2B_ not modelled 97.6 17 PDB header:protein transport Chain: B: PDB Molecule:protein transport protein sec24c; PDBTitle: crystal structure of the human copii-coat protein sec24c 40 c3egxB_ not modelled 97.5 18 PDB header:protein transport Chain: B: PDB Molecule:protein transport protein sec24a; PDBTitle: crystal structure of the mammalian copii-coat protein2 sec23a/24a complexed with the snare protein sec22b and3 bound to the transport signal sequence of the snare protein4 bet1 41 c3eg9A_ not modelled 97.5 19 PDB header:protein transport Chain: A: PDB Molecule:protein transport protein sec23a; PDBTitle: crystal structure of the mammalian copii-coat protein2 sec23/24 bound to the transport signal sequence of membrin 42 d2qtva3 not modelled 97.4 19 Fold:vWA-like Superfamily:vWA-like Family:Trunk domain of Sec23/24 43 c3eg9B_ not modelled 97.3 16 PDB header:protein transport Chain: B: PDB Molecule:sec24 related gene family, member d; PDBTitle: crystal structure of the mammalian copii-coat protein2 sec23/24 bound to the transport signal sequence of membrin 44 c1m2oA_ not modelled 97.0 18 PDB header:protein transport/signaling protein Chain: A: PDB Molecule:protein transport protein sec23; PDBTitle: crystal structure of the sec23-sar1 complex 45 c3eyaE_ not modelled 84.0 13 PDB header:oxidoreductase Chain: E: PDB Molecule:pyruvate dehydrogenase [cytochrome]; PDBTitle: structural basis for membrane binding and catalytic2 activation of the peripheral membrane enzyme pyruvate3 oxidase from escherichia coli 46 d2djia3 not modelled 77.6 14 Fold:Thiamin diphosphate-binding fold (THDP-binding) Superfamily:Thiamin diphosphate-binding fold (THDP-binding) Family:Pyruvate oxidase and decarboxylase PP module 47 d1jsca3 not modelled 73.7 18 Fold:Thiamin diphosphate-binding fold (THDP-binding) Superfamily:Thiamin diphosphate-binding fold (THDP-binding) Family:Pyruvate oxidase and decarboxylase PP module 48 c1jscA_ not modelled 67.6 18 PDB header:lyase Chain: A: PDB Molecule:acetohydroxy-acid synthase; PDBTitle: crystal structure of the catalytic subunit of yeast2 acetohydroxyacid synthase: a target for herbicidal3 inhibitors 49 d1twda_ not modelled 64.0 19 Fold:TIM beta/alpha-barrel Superfamily:CutC-like Family:CutC-like 50 d2ji7a3 not modelled 63.6 18 Fold:Thiamin diphosphate-binding fold (THDP-binding) Superfamily:Thiamin diphosphate-binding fold (THDP-binding) Family:Pyruvate oxidase and decarboxylase PP module 51 d2piaa2 not modelled 61.7 13 Fold:Ferredoxin reductase-like, C-terminal NADP-linked domain Superfamily:Ferredoxin reductase-like, C-terminal NADP-linked domain Family:Aromatic dioxygenase reductase-like 52 d1li4a2 not modelled 56.9 21 Fold:Flavodoxin-like Superfamily:Formate/glycerate dehydrogenase catalytic domain-like Family:S-adenosylhomocystein hydrolase 53 d1t9ba3 not modelled 54.3 18 Fold:Thiamin diphosphate-binding fold (THDP-binding) Superfamily:Thiamin diphosphate-binding fold (THDP-binding) Family:Pyruvate oxidase and decarboxylase PP module 54 d1dkua2 not modelled 54.1 18 Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosylpyrophosphate synthetase-like 55 d1ozha3 not modelled 51.7 17 Fold:Thiamin diphosphate-binding fold (THDP-binding) Superfamily:Thiamin diphosphate-binding fold (THDP-binding) Family:Pyruvate oxidase and decarboxylase PP module 56 c3iwpK_ not modelled 51.1 16 PDB header:metal binding protein Chain: K: PDB Molecule:copper homeostasis protein cutc homolog; PDBTitle: crystal structure of human copper homeostasis protein cutc 57 d1ybha3 not modelled 49.9 16 Fold:Thiamin diphosphate-binding fold (THDP-binding) Superfamily:Thiamin diphosphate-binding fold (THDP-binding) Family:Pyruvate oxidase and decarboxylase PP module 58 d1wd5a_ not modelled 46.4 17 Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases) 59 c2bdqA_ not modelled 46.2 17 PDB header:metal transport Chain: A: PDB Molecule:copper homeostasis protein cutc; PDBTitle: crystal structure of the putative copper homeostasis2 protein cutc from streptococcus agalactiae, northeast3 strucural genomics target sar15. 60 d1y0ba1 not modelled 44.7 16 Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases) 61 c3d64A_ not modelled 44.3 19 PDB header:hydrolase Chain: A: PDB Molecule:adenosylhomocysteinase; PDBTitle: crystal structure of s-adenosyl-l-homocysteine hydrolase from2 burkholderia pseudomallei 62 c3oneA_ not modelled 42.3 17 PDB header:hydrolase/hydrolase substrate Chain: A: PDB Molecule:adenosylhomocysteinase; PDBTitle: crystal structure of lupinus luteus s-adenosyl-l-homocysteine2 hydrolase in complex with adenine 63 c2yzkC_ not modelled 40.2 17 PDB header:transferase Chain: C: PDB Molecule:orotate phosphoribosyltransferase; PDBTitle: crystal structure of orotate phosphoribosyltransferase from2 aeropyrum pernix 64 d2ez9a3 not modelled 39.6 13 Fold:Thiamin diphosphate-binding fold (THDP-binding) Superfamily:Thiamin diphosphate-binding fold (THDP-binding) Family:Pyruvate oxidase and decarboxylase PP module 65 c2vf7B_ not modelled 38.6 20 PDB header:dna-binding protein Chain: B: PDB Molecule:excinuclease abc, subunit a.; PDBTitle: crystal structure of uvra2 from deinococcus radiodurans 66 c2wnsB_ not modelled 37.1 19 PDB header:transferase Chain: B: PDB Molecule:orotate phosphoribosyltransferase; PDBTitle: human orotate phosphoribosyltransferase (oprtase) domain of2 uridine 5'-monophosphate synthase (umps) in complex with3 its substrate orotidine 5'-monophosphate (omp) 67 d2aeea1 not modelled 37.1 16 Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases) 68 c2djiA_ not modelled 36.9 14 PDB header:oxidoreductase Chain: A: PDB Molecule:pyruvate oxidase; PDBTitle: crystal structure of pyruvate oxidase from aerococcus2 viridans containing fad 69 c1d4fD_ not modelled 36.7 17 PDB header:hydrolase Chain: D: PDB Molecule:s-adenosylhomocysteine hydrolase; PDBTitle: crystal structure of recombinant rat-liver d244e mutant s-2 adenosylhomocysteine hydrolase 70 c3m3hA_ not modelled 34.9 19 PDB header:transferase Chain: A: PDB Molecule:orotate phosphoribosyltransferase; PDBTitle: 1.75 angstrom resolution crystal structure of an orotate2 phosphoribosyltransferase from bacillus anthracis str. 'ames3 ancestor' 71 d2r8oa2 not modelled 34.2 14 Fold:Thiamin diphosphate-binding fold (THDP-binding) Superfamily:Thiamin diphosphate-binding fold (THDP-binding) Family:TK-like PP module 72 c3pihA_ not modelled 33.7 16 PDB header:hydrolase/dna Chain: A: PDB Molecule:uvrabc system protein a; PDBTitle: t. maritima uvra in complex with fluorescein-modified dna 73 c2jlaD_ not modelled 32.2 12 PDB header:transferase Chain: D: PDB Molecule:2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene PDBTitle: crystal structure of e.coli mend, 2-succinyl-5-enolpyruvyl-2 6-hydroxy-3-cyclohexadiene-1-carboxylate synthase - semet3 protein 74 d1l1qa_ not modelled 31.3 13 Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases) 75 c2pgnA_ not modelled 31.3 13 PDB header:hydrolase Chain: A: PDB Molecule:cyclohexane-1,2-dione hydrolase (cdh); PDBTitle: the crystal structure of fad and thdp-dependent cyclohexane-1,2-dione2 hydrolase in complex with cyclohexane-1,2-dione 76 c2ji6B_ not modelled 30.4 20 PDB header:lyase Chain: B: PDB Molecule:oxalyl-coa decarboxylase; PDBTitle: x-ray structure of oxalyl-coa decarboxylase in complex with2 3-deaza-thdp and oxalyl-coa 77 c1sy7B_ not modelled 29.4 14 PDB header:oxidoreductase Chain: B: PDB Molecule:catalase 1; PDBTitle: crystal structure of the catalase-1 from neurospora crassa, native2 structure at 1.75a resolution. 78 c1upaC_ not modelled 29.2 13 PDB header:synthase Chain: C: PDB Molecule:carboxyethylarginine synthase; PDBTitle: carboxyethylarginine synthase from streptomyces2 clavuligerus (semet structure) 79 c3n58D_ not modelled 28.9 19 PDB header:hydrolase Chain: D: PDB Molecule:adenosylhomocysteinase; PDBTitle: crystal structure of s-adenosyl-l-homocysteine hydrolase from brucella2 melitensis in ternary complex with nad and adenosine, orthorhombic3 form 80 c3gvpB_ not modelled 28.6 17 PDB header:hydrolase Chain: B: PDB Molecule:adenosylhomocysteinase 3; PDBTitle: human sahh-like domain of human adenosylhomocysteinase 3 81 c1ozhD_ not modelled 28.4 17 PDB header:lyase Chain: D: PDB Molecule:acetolactate synthase, catabolic; PDBTitle: the crystal structure of klebsiella pneumoniae acetolactate2 synthase with enzyme-bound cofactor and with an unusual3 intermediate. 82 d1pvda3 not modelled 26.7 13 Fold:Thiamin diphosphate-binding fold (THDP-binding) Superfamily:Thiamin diphosphate-binding fold (THDP-binding) Family:Pyruvate oxidase and decarboxylase PP module 83 c1j9zB_ not modelled 26.0 12 PDB header:oxidoreductase Chain: B: PDB Molecule:nadph-cytochrome p450 reductase; PDBTitle: cypor-w677g 84 c1t9dB_ not modelled 25.9 18 PDB header:transferase Chain: B: PDB Molecule:acetolactate synthase, mitochondrial; PDBTitle: crystal structure of yeast acetohydroxyacid synthase in2 complex with a sulfonylurea herbicide, metsulfuron methyl 85 c2hgsA_ not modelled 25.4 13 PDB header:amine/carboxylate ligase Chain: A: PDB Molecule:protein (glutathione synthetase); PDBTitle: human glutathione synthetase 86 d1q6za3 not modelled 25.2 20 Fold:Thiamin diphosphate-binding fold (THDP-binding) Superfamily:Thiamin diphosphate-binding fold (THDP-binding) Family:Pyruvate oxidase and decarboxylase PP module 87 c3gbcA_ not modelled 24.6 10 PDB header:hydrolase Chain: A: PDB Molecule:pyrazinamidase/nicotinamidas pnca; PDBTitle: determination of the crystal structure of the pyrazinamidase from2 m.tuberculosis : a structure-function analysis for prediction3 resistance to pyrazinamide 88 c1yi1A_ not modelled 24.5 14 PDB header:transferase Chain: A: PDB Molecule:acetolactate synthase; PDBTitle: crystal structure of arabidopsis thaliana acetohydroxyacid synthase in2 complex with a sulfonylurea herbicide, tribenuron methyl 89 d1chda_ not modelled 24.4 8 Fold:Methylesterase CheB, C-terminal domain Superfamily:Methylesterase CheB, C-terminal domain Family:Methylesterase CheB, C-terminal domain 90 d1v8ba2 not modelled 23.6 15 Fold:Flavodoxin-like Superfamily:Formate/glycerate dehydrogenase catalytic domain-like Family:S-adenosylhomocystein hydrolase 91 c3efhB_ not modelled 23.2 19 PDB header:transferase Chain: B: PDB Molecule:ribose-phosphate pyrophosphokinase 1; PDBTitle: crystal structure of human phosphoribosyl pyrophosphate2 synthetase 1 92 d1itza1 not modelled 22.7 11 Fold:Thiamin diphosphate-binding fold (THDP-binding) Superfamily:Thiamin diphosphate-binding fold (THDP-binding) Family:TK-like PP module 93 c2panF_ not modelled 22.4 15 PDB header:lyase Chain: F: PDB Molecule:glyoxylate carboligase; PDBTitle: crystal structure of e. coli glyoxylate carboligase 94 c4a2iV_ not modelled 22.2 12 PDB header:ribosome/hydrolase Chain: V: PDB Molecule:putative ribosome biogenesis gtpase rsga; PDBTitle: cryo-electron microscopy structure of the 30s subunit in complex with2 the yjeq biogenesis factor 95 c2bpoA_ not modelled 21.7 13 PDB header:reductase Chain: A: PDB Molecule:nadph-cytochrom p450 reductase; PDBTitle: crystal structure of the yeast cpr triple mutant: d74g,2 y75f, k78a. 96 c2c4kD_ not modelled 21.4 11 PDB header:regulatory protein Chain: D: PDB Molecule:phosphoribosyl pyrophosphate synthetase- PDBTitle: crystal structure of human phosphoribosylpyrophosphate2 synthetase-associated protein 39 (pap39) 97 c1cqxB_ not modelled 21.3 11 PDB header:lipid binding protein Chain: B: PDB Molecule:flavohemoprotein; PDBTitle: crystal structure of the flavohemoglobin from alcaligenes eutrophus at2 1.75 a resolution 98 c3sftA_ not modelled 21.2 11 PDB header:hydrolase Chain: A: PDB Molecule:chemotaxis response regulator protein-glutamate PDBTitle: crystal structure of thermotoga maritima cheb methylesterase catalytic2 domain 99 c2x7jA_ not modelled 21.2 16 PDB header:transferase Chain: A: PDB Molecule:2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene PDBTitle: structure of the menaquinone biosynthesis protein mend from2 bacillus subtilis 100 c3cueM_ not modelled 21.2 6 PDB header:protein transport Chain: M: PDB Molecule:transport protein particle 23 kda subunit; PDBTitle: crystal structure of a trapp subassembly activating the rab2 ypt1p 101 c2dy0A_ not modelled 20.8 20 PDB header:transferase Chain: A: PDB Molecule:adenine phosphoribosyltransferase; PDBTitle: crystal structure of project jw0458 from escherichia coli 102 d1gpua1 not modelled 20.3 15 Fold:Thiamin diphosphate-binding fold (THDP-binding) Superfamily:Thiamin diphosphate-binding fold (THDP-binding) Family:TK-like PP module 103 c1tllA_ not modelled 20.1 14 PDB header:oxidoreductase Chain: A: PDB Molecule:nitric-oxide synthase, brain; PDBTitle: crystal structure of rat neuronal nitric-oxide synthase2 reductase module at 2.3 a resolution.