PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c3ragA_

Fold library id	PDB Header	Molecule	Title
c3ragA_	PDB header: structural genomics, unknown function	Chain: A: PDB Molecule: uncharacterized protein;	PDBTitle: crystal structure of uncharacterized protein aaci_0196 from2 alicyclobacillus acidocaldarius subsp. acidocaldarius dsm 446

Links to external resources
Added to library: Sat Sep 17 09:53:33 2011

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence N A X T R E A T I R Q I L V I T D G C S N I G P D P V E A A R R A H R H G I V V N V I G I V G R G D A G E Q G Y Q E A H S I A D A G G G X C

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S S
T T
S S S
T T
T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R I V Q P A D I S A T A Q X X T H Q T X Q X T L Q Q V V N Q E L L A V X G K S T E D L P P A D R A R V X Q V V E K L E D E V A L H L V V C L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G S S
G G G S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence D T S A S X R D K I P T V R E A V R D L A L S L K V R S G P L A V S V I A F P G K G E E A T R L V Q P F S S E V N V A A L E A E L V A R G G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S G G G T T T T T S S S
S
S T T
S
S S
S

. . . . . . . . . 220 . . . . . . . . . 230 . .

Sequence T P T G P A I D H A A D L L L S H A R N V D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	N	A	X	T	R	E	A	T	I	R	Q	I	L	V	I	T	D	G	C	S	N	I	G	P	D	P	V	E	A	A	R	R	A	H	R	H	G	I	V	V	N	V	I	G	I	V	G	R	G	D	A	G	E	Q	G	Y	Q	E	A	H	S	I	A	D	A	G	G	G	X	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	S	S				S	S	S												T	T											S	S	S		T	T													T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	I	V	Q	P	A	D	I	S	A	T	A	Q	X	X	T	H	Q	T	X	Q	X	T	L	Q	Q	V	V	N	Q	E	L	L	A	V	X	G	K	S	T	E	D	L	P	P	A	D	R	A	R	V	X	Q	V	V	E	K	L	E	D	E	V	A	L	H	L	V	V	C	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					G	G	G																													S	S			G	G	G	S																			S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	D	T	S	A	S	X	R	D	K	I	P	T	V	R	E	A	V	R	D	L	A	L	S	L	K	V	R	S	G	P	L	A	V	S	V	I	A	F	P	G	K	G	E	E	A	T	R	L	V	Q	P	F	S	S	E	V	N	V	A	A	L	E	A	E	L	V	A	R	G	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	G	G	G	T	T	T																T	T	S	S	S										S		S	T	T		S									S	S														S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Sequence	T	P	T	G	P	A	I	D	H	A	A	D	L	L	L	S	H	A	R	N	V	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)