Fold library entry viewer: c1upaC_

Added to library: Tue Mar 16 14:20:33 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	T	A	A	H	A	L	L	S	R	L	R	D	H	G	V	G	K	V	F	G	V	V	G	R	E	A	A	S	I	L	F	D	E	V	E	G	I	D	F	V	L	T	R	H	E	F	T	A	G	V	A	A	D	V	L	A	R	I	T	G	R	P	Q	A	C	W	A	T	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T										G	G	G	G	T			S		S	S	T	T							S	S																	S								T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	P	G	X	T	N	L	S	T	G	I	A	T	S	V	L	D	R	S	P	V	I	A	L	A	A	Q	S	E	S	H	D	I	F	P	N	D	T	H	Q	C	L	D	S	V	A	I	V	A	P	X	S	K	Y	A	V	E	L	Q	R	P	H	E	I	T	D	L	V	D	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T																	T										S		G	G	G			T	T	T	S	T	T									G	G	G	S	S							S	G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	V	N	A	A	X	T	E	P	V	G	P	S	F	I	S	L	P	V	D	L	L	G	S	S	E	G	I	D	P	P	A	N	T	P	A	K	P	V	G	V	V	A	D	G	W	Q	K	A	A	D	Q	A	A	A	L	L	A	E	A	K	H	P	V	L	V	V	G	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	B	S	S														T			T	T									S	S		B					T	T																S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	I	R	S	G	A	V	P	A	I	R	A	L	A	E	R	L	N	I	P	V	I	T	T	Y	I	A	K	G	V	L	P	V	G	H	E	L	N	Y	G	A	V	T	G	Y	X	D	G	I	L	N	F	P	A	L	Q	T	X	F	A	P	V	D	L	V	L	T	V	G	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T													T							S	T	T	T	T	S	S		T	T		T	T							T	T						T	S								T	T								T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	D	Y	A	E	D	L	R	P	S	X	W	Q	K	G	I	E	K	K	T	V	R	I	S	P	T	V	N	P	I	P	R	V	Y	R	P	D	V	D	V	V	T	D	V	L	A	F	V	E	H	F	E	T	A	T	A	S	F	G	A	K	Q	R	H	D	I	E	P	L	R	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G	S									S	S									S	S			S		T	T	T				S					S													T	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	R	I	A	E	F	L	A	D	P	E	T	Y	E	D	G	X	R	V	H	Q	V	I	D	S	X	N	T	V	X	E	E	A	A	E	P	G	E	G	T	I	V	S	D	I	G	F	F	R	H	Y	G	V	L	F	A	R	A	D	Q	P	F	G	F	L	T	S	A	G	C	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T						S	S		B																	S		T	T								S	S														S	T	T	S					S	S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	S	F	G	Y	G	I	P	A	A	I	G	A	Q	X	A	R	P	D	Q	P	T	F	L	I	A	G	D	G	G	F	H	S	N	S	S	D	L	E	T	I	A	R	L	N	L	P	I	V	T	V	V	V	N	N	D	T	N	G	L	I	E	L	Y	Q	N	I	G	H	H	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T													S	T	T	S														T	G	G	G								T											S	B													S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.
Sequence	S	H	D	P	A	V	K	F	G	G	V	D	F	V	A	L	A	E	A	N	G	V	D	A	T	R	A	T	N	R	E	E	L	L	A	A	L	R	K	G	A	E	L	G	R	P	F	L	I	E	V	P	V	N	Y	D	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G	T	B													T	T								S														S	S	S								B

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PDB structure

FASTA sequence

Hidden Markov model

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