Fold library entry viewer: c1sy7B_

Added to library: Tue Mar 16 12:01:46 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	R	L	T	T	D	Y	G	V	K	Q	T	T	A	D	D	W	L	R	I	V	S	D	D	K	I	G	P	S	L	L	E	D	P	F	A	R	E	R	I	M	R	F	D	H	E	R	I	P	E	R	V	V	H	A	R	G	S	G	A	F	G	K	F	K	V	Y	E	S	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				B		T	T	S		B		S		S	S								S	S							T	T													T							S	S	S		S											S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	D	L	T	M	A	P	V	L	T	D	T	S	R	E	T	P	V	F	V	R	F	S	T	V	L	G	S	R	G	S	A	D	T	V	R	D	V	R	G	F	A	V	K	F	Y	T	E	E	G	N	W	D	L	V	G	N	N	I	P	V	F	F	I	Q	D	A	I	K	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T				G	G	G	T		S	S												S	S	S		T	T	S		T	T	S	S	S											T	T									S	S	S	S		S		S	S	G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	D	V	I	H	A	G	K	P	E	P	H	N	E	V	P	Q	A	Q	S	A	H	N	N	F	W	D	F	Q	F	N	H	T	E	A	T	H	M	F	T	W	A	M	S	D	R	A	I	P	R	S	L	R	M	M	Q	G	F	G	V	N	T	Y	T	L	I	N	A	Q	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S		B	T	T	T	T	B		T	T				S											G	G	G								T	S	G	G	G	S	B	S		G	G	G	S						S							T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	K	R	H	F	V	K	F	H	W	T	P	E	L	G	V	H	S	L	V	W	D	E	A	L	K	L	A	G	Q	D	P	D	F	H	R	K	D	L	W	E	A	I	E	N	G	A	Y	P	K	W	K	F	G	I	Q	A	I	A	E	E	D	E	H	K	F	D	F	D	I	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T				B														T	T												T	T														G	G	G	T	T		S	S	S		T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	D	A	T	K	I	W	P	E	D	L	V	P	V	R	Y	I	G	E	M	E	L	N	R	N	P	D	E	F	F	P	Q	T	E	Q	I	A	F	C	T	S	H	V	V	N	G	I	G	F	S	D	D	P	L	L	Q	G	R	N	F	S	Y	F	D	T	Q	I	S	R	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T					T	T	T	S															S						T	T	T					T	T				T	T							T	T											T					T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	V	N	F	Q	E	L	P	I	N	R	P	V	C	P	V	M	N	F	N	R	D	G	A	M	R	H	T	I	S	R	G	T	V	N	Y	Y	P	N	R	F	D	A	C	P	P	A	S	L	K	E	G	G	Y	L	E	Y	A	Q	K	V	A	G	I	K	A	R	A	R	S	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	G	G	G	S	T	T	T			S	S										T	T							S	S			S	S	S		T	T			S					T	T	T	T											S				S				G
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	K	F	K	E	H	F	S	Q	A	Q	L	F	Y	N	S	M	S	P	I	E	K	Q	H	M	I	N	A	F	G	F	E	L	D	H	C	E	D	P	V	V	Y	G	R	M	V	Q	R	L	A	D	I	D	L	G	L	A	Q	T	I	A	E	M	V	G	G	E	A	P	T	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G			S										S																		T															T	T	T														S				S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	T	N	H	P	N	H	G	R	K	T	I	N	L	S	Q	T	E	F	P	P	A	T	P	T	I	K	S	R	R	V	A	I	I	I	A	D	G	Y	D	N	V	A	Y	D	A	A	Y	A	A	I	S	A	N	Q	A	I	P	L	V	I	G	P	R	R	S	K	V	T	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S								S	S		S	G	G	G				S	S	S			T	T									T	T	B															T	T								S		S	S				B	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	N	G	S	T	V	Q	P	H	H	H	L	E	G	F	R	S	T	M	V	D	A	I	F	I	P	G	G	A	K	A	A	E	T	L	S	K	N	G	R	A	L	H	W	I	R	E	A	F	G	H	L	K	A	I	G	A	T	G	E	A	V	D	L	V	A	K	A	I	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S						S			T	T	T			G	G	G	S	S																T														T	T							T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.
Sequence	P	Q	V	T	V	S	S	E	A	E	V	H	E	S	Y	G	V	V	T	L	K	K	V	K	P	E	S	F	T	D	A	V	K	I	A	K	G	A	A	G	F	L	G	E	F	F	Y	A	I	A	Q	H	R	N	W	D	R	E	L	D	G	L	H	S	M	I	A	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S					S	S	S					T	T					S	S			T	T	T	T	T	S					S	T	T		S	S											T		S							T	T		G	G	G	S

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PDB structure

FASTA sequence

Hidden Markov model

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