Fold library entry viewer: c2pgnA_

Added to library: Tue Mar 16 12:15:18 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	I	K	R	G	A	D	L	I	V	E	A	L	E	E	Y	G	T	E	Q	V	V	G	F	I	G	H	T	S	H	F	V	A	D	A	F	S	K	S	H	L	G	K	R	V	I	N	P	A	T	E	L	G	G	A	W	M	V	N	G	Y	N	Y	V	K	D	R	S	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	T									S	G	G	G									T	S	T	T	S	T	T		B			S	S																T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	G	A	W	H	C	V	G	N	L	L	L	H	A	A	M	Q	E	A	R	T	G	R	I	P	A	V	H	I	G	L	N	S	D	G	R	L	A	G	R	S	E	A	A	Q	Q	V	P	W	Q	S	F	T	P	I	A	R	S	T	Q	R	V	E	R	L	D	K	V	G	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						G	G	G	G	G	G											T	T										S		G	G	G	T	T		T	T		S	S				G	G	G	G	T	T	T	S	S							S	G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	I	H	E	A	F	R	V	A	E	G	H	P	A	G	P	A	Y	V	D	I	P	F	D	L	T	A	D	Q	I	D	D	K	A	L	V	P	R	G	A	T	R	A	K	S	V	L	H	A	P	N	E	D	V	R	E	A	A	A	Q	L	V	A	A	K	N	P	V	I	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	S	S	S										T										T	T	T	S																													S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	G	G	G	V	A	R	S	G	G	S	E	A	L	L	K	L	A	E	M	V	G	V	P	V	V	T	T	S	T	G	A	G	V	F	P	E	T	H	A	L	A	M	G	S	A	G	F	C	G	W	K	S	A	N	D	M	M	A	A	A	D	F	V	L	V	L	G	S	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T													T							T	T	T	T	T	S	S		T	T	S	T	T						S	T	T	S												S						S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	L	S	D	W	G	I	A	Q	G	Y	I	T	K	M	P	K	F	V	H	V	D	T	D	P	A	V	L	G	T	F	Y	F	P	L	L	S	V	V	A	D	A	K	T	F	M	E	Q	L	I	E	V	L	P	G	T	S	G	F	K	A	V	R	Y	Q	E	R	E	N	F	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T	T	T	T	T	T	T					S						S		G	G	G	T	T	S	S	S			S																		G	G	G	S	T	T						G	G	G	S	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	Q	A	T	E	F	R	A	A	W	D	G	W	V	R	E	Q	E	S	G	D	G	M	P	A	S	M	F	R	A	M	A	E	V	R	K	V	Q	R	P	E	D	I	I	V	T	D	I	G	N	H	T	L	P	M	F	G	G	A	I	L	Q	R	P	R	R	L	V	T	S	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T					S	S													T			T	T							S	S	T	T											S	S	T	T				S		T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	A	E	G	I	L	G	C	G	F	P	M	A	L	G	A	Q	L	A	E	P	N	S	R	V	F	L	G	T	G	D	G	A	L	Y	Y	H	F	N	E	F	R	V	A	V	E	H	K	L	P	V	I	T	M	V	F	T	N	E	S	Y	G	A	N	W	T	L	M	N	H	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T			T	T														T	T	S															G	G	G							T	T											S	B
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	F	G	Q	N	N	W	T	E	F	M	N	P	D	W	V	G	I	A	K	A	F	G	A	Y	G	E	S	V	R	E	T	G	D	I	A	G	A	L	Q	R	A	I	D	S	G	K	P	A	L	I	E	I	P	V	S	K	T	Q	G	L	A	S	D	P	V	G	G	V	G	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S			S		B														T							T	T	T															S										S	S	S	S	T	T	T			S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.
Sequence	N	L	L	L	K	G	R	E	I	P	V	D	T	G	G	S	M	Y	P	G	E	N	L	L	H	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S											S	S				T	T	G	G	G	G	G

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PDB structure

FASTA sequence

Hidden Markov model

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