Fold library entry viewer: c1u8cB_

Added to library: Tue Mar 16 12:15:11 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	P	N	I	C	T	T	R	G	V	S	S	C	Q	Q	C	L	A	V	S	P	M	C	A	W	C	S	D	E	A	L	P	L	G	S	P	R	C	D	L	K	E	N	L	L	K	D	N	C	A	I	E	F	P	V	S	E	A	R	V	L	E	D	R	P	L	S	D	K	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S					T	T	S	S										T	T			B				S	S				S	S		S	B	S		T					T	T	S																				S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	G	D	S	S	Q	V	T	Q	V	S	P	Q	R	I	A	L	R	L	R	P	D	D	S	K	N	F	S	I	Q	V	R	Q	V	E	D	Y	P	V	D	I	Y	Y	L	M	D	L	S	Y	S	M	K	D	D	L	W	S	I	Q	N	L	G	T	K	L	A	T	Q	M	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	S				S	B	S								B		T	T													S	S												B	G	G	G	T	T	T	T	S	T	T	T	S	T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	L	T	S	N	L	R	I	G	F	G	A	F	V	D	K	P	V	S	P	Y	M	Y	I	S	P	P	E	A	L	E	N	P	C	Y	D	M	K	T	T	C	L	P	M	F	G	Y	K	H	V	L	T	L	T	D	Q	V	T	R	F	N	E	E	V	K	K	Q	S	V	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T		S														S	T	T	T	T	T		S	S	S	G	G	G	S	S	S		T	T	T	S	S							S							S	B	S		T	T	T	T					T	T				B
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	R	N	R	D	A	P	E	G	G	F	D	A	I	M	Q	A	T	V	C	D	E	K	I	G	W	R	N	D	A	S	H	L	L	V	F	T	T	D	A	K	T	H	I	A	L	D	G	R	L	A	G	I	V	Q	P	N	D	G	Q	C	H	V	G	S	D	N	H	Y	S	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	S	S	B													T	T	T	T				T	T	S									S	S		B			T	T	G	G	G	T	T	T			S										T	T		B		T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	S	T	T	M	D	Y	P	S	L	G	L	M	T	E	K	L	S	Q	K	N	I	N	L	I	F	A	V	T	E	N	V	V	N	L	Y	Q	N	Y	S	E	L	I	P	G	T	T	V	G	V	L	S	M	D	S	S	N	V	L	Q	L	I	V	D	A	Y	G	K	I	R	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	S															T	T																				T	T	S	T	T								T	T		G	G	G													T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	K	V	E	L	E	V	R	D	L	P	E	E	L	S	L	S	F	N	A	T	C	L	N	N	E	V	I	P	G	L	K	S	C	M	G	L	K	I	G	D	T	V	S	F	S	I	E	A	K	V	R	G	C	P	Q	E	K	E	K	S	F	T	I	K	P	V	G	F	K	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S			T	T											T	T					T						S			T	T												S	S					S									T	T		S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	S	L	I	V	Q	V	T	F	D	C	D	C	D	D	F	S	C	V	R	Y	K	G	E	M	C	S	G	H	G	Q	C	S	C	G	D	C	L	C	D	S	D	W	T	G	Y	Y	C	N	C	T	T	R	T	D	T	C	M	S	S	N	G	L	L	C	S	G	R	G	K	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								B						S	S	S				S	S	S	S	T	T	T	T	S					S	S	S					T	T			S	S	S	S							G	G	G			T	T	S	S	G	G	G	G	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	E	C	G	S	C	V	C	I	Q	P	G	S	Y	G	D	T	C	E	K	C	P	T	C	P	D	A	C	T	F	K	K	E	C	V	E	C	K	K	F	D	R	E	P	Y	M	T	E	N	T	C	N	R	Y	C	R	D	E	I	E	S	V	K	E	L	K	D	T	G	K	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T							S	S		B	S	S	S	S		B		T	T	S							T								T	T	S		S					T	T		S	S	S	S			S					B		S	S					S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.
Sequence	A	V	N	C	T	Y	K	N	E	D	D	C	V	V	R	F	Q	Y	Y	E	D	S	S	G	K	S	I	L	Y	V	V	E	E	P	E	C	P	K	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	S											T	T	T						B	B	S	S		B

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PDB structure

FASTA sequence

Hidden Markov model

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