Fold library entry viewer: c1pd0A_

Added to library: Tue Mar 16 12:33:26 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	R	P	M	N	Q	L	Y	P	I	D	L	L	T	E	L	P	P	P	I	T	D	L	T	L	P	P	P	P	L	V	I	P	P	E	R	M	L	V	P	S	E	L	S	N	A	S	P	D	Y	I	R	S	T	L	N	A	V	P	K	N	S	S	L	L	K	K	S	K	L	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											G	G	G	S		S			G	G	G	G	G	S									G	G	G	S	S	S		S	G	G	G	S			T	T	T				S	B	S	S			S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	F	G	L	V	I	R	P	Y	Q	H	L	Y	D	D	I	D	P	P	P	L	N	E	D	G	L	I	V	R	C	R	R	C	R	S	Y	M	N	P	F	V	T	F	I	E	Q	G	R	R	W	R	C	N	F	C	R	L	A	N	D	V	P	M	Q	M	D	Q	P	K	S	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S			S	S	S	T	T	S	S				B			S					B		S	S	S			B			T	T					T	T	T	T					T	T	T								G	G	G	G					G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Y	D	R	N	E	I	K	C	A	V	M	E	Y	M	A	P	K	E	Y	T	L	R	Q	P	P	P	A	T	Y	C	F	L	I	D	V	S	Q	S	S	I	K	S	G	L	L	A	T	T	I	N	T	L	L	Q	N	L	D	S	I	P	N	H	D	E	R	T	R	I	S	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	S						S								G	G	G		S	S						B								S							T											T	T	T	T	T	S			T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	L	C	V	D	N	A	I	H	Y	F	K	I	P	L	D	S	E	N	I	N	M	M	D	I	A	D	L	E	E	P	N	S	M	V	V	S	L	K	A	C	R	Q	N	I	E	T	L	L	T	K	I	P	Q	I	F	Q	S	N	L	I	T	N	F	A	L	G	P	A	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S	S									G	G	G										T	T			T	T	T	S			T	T	T	T															T	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	S	A	Y	H	L	I	G	G	V	G	G	K	I	I	V	V	S	G	T	L	P	N	L	G	I	G	K	L	Q	R	D	S	F	Y	K	N	F	T	I	D	C	S	K	V	Q	I	T	V	D	L	F	L	A	S	E	D	Y	M	D	V	A	S	L	S	N	L	S	R	F	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	T									S	S				S	S	T	T																T	T	T	T										S	S													T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	A	G	Q	T	H	F	Y	P	G	F	S	G	K	N	P	N	D	I	V	K	F	S	T	E	F	A	K	H	I	S	M	D	F	C	M	E	T	V	M	R	A	R	G	S	T	G	L	R	M	S	R	F	Y	G	H	F	F	N	R	S	S	D	L	C	A	F	S	T	M	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T								T			T	T	S																															T	T								S	S	S	B		S	S	S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	R	D	Q	S	Y	L	F	E	V	N	V	D	E	S	I	M	A	D	Y	C	Y	V	Q	V	A	V	L	L	S	L	N	N	S	Q	R	R	I	R	I	I	T	L	A	M	P	T	T	E	S	L	A	E	V	Y	A	S	A	D	Q	L	A	I	A	S	F	Y	N	S	K	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S											S				S	S													T	T	T															S								T	B
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	V	E	K	A	L	N	S	S	L	D	D	A	R	V	L	I	N	K	S	V	Q	D	I	L	A	T	Y	K	K	E	I	V	G	G	A	P	L	R	L	C	A	N	L	R	M	F	P	L	L	M	H	S	L	T	K	H	M	A	F	R	S	G	I	V	P	S	D	H	R	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T																																		G	G	G	T	T										T	S	T	T	T		S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	S	A	L	N	N	L	E	S	L	P	L	K	Y	L	I	K	N	I	Y	P	D	V	Y	S	L	H	D	M	A	D	E	A	G	L	P	V	G	T	I	V	L	P	Q	P	I	N	A	T	S	S	L	F	E	R	Y	G	L	Y	L	I	D	N	G	N	E	L	F	L	W	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S										S							T	T			S	S	T	T	S	B				B						B		S	S	G	G	G			T	T								S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	G	G	D	A	V	P	A	L	V	F	D	V	F	G	T	Q	D	I	F	D	I	P	I	G	K	Q	E	I	P	V	V	E	N	S	E	F	N	Q	R	V	R	N	I	I	N	Q	L	R	N	H	D	D	V	I	T	Y	Q	S	L	Y	I	V	R	G	A	A	R	E	V	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T											S		S		G	G	G	S											T	T															T			S	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.
Sequence	T	L	R	L	W	A	S	S	T	L	V	E	D	K	I	L	N	N	E	S	Y	R	E	F	L	Q	I	M	K	A	R	I	S	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T		T	T	S		B	T	T	B														T

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PDB structure

FASTA sequence

Hidden Markov model

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