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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: d1q6za3

Fold library idFoldSuperfamilyFamily
d1q6za3Thiamin diphosphate-binding fold (THDP-binding)Thiamin diphosphate-binding fold (THDP-binding)Pyruvate oxidase and decarboxylase PP module


Added to library: Tue Mar 16 13:02:22 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EPAKVDQDAGRLHPETVFDTLNDMAPENAIYLNESTSTTAQMWQRLNMRNPGSYYFCAAGGLGFALPAAI
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Known secondary structure (DSSP)







SSSB
S
TT

TTS



SSS

TT

TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence GVQLAEPERQVIAVIGDGSANYSISALWTAAQYNIPTIFVIMNNGTYGALRWFAGVLEAENVPGLDVPGI
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Known secondary structure (DSSP)
TTS
TTTGGGT



SB
T

S

S
B



 .........150.........160.........170.........180...
Sequence DFRALAKGYGVQALKADNLEQLKGSLQEALSAKGPVLIEVSTV
Predicted secondary structure









SS confidence










































Known secondary structure (DSSP)
T
SST
SS
B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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