Fold library entry viewer: c1tllA_

Added to library: Tue Mar 16 14:27:05 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	K	R	V	K	A	T	I	L	Y	A	T	E	T	G	K	S	Q	A	Y	A	K	T	L	C	E	I	F	K	H	A	F	D	A	K	A	M	S	M	E	E	Y	D	I	V	H	L	E	H	E	A	L	V	L	V	V	T	S	T	F	G	N	G	D	P	P	E	N	G	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S										S	S	S														T	T	T	S							T	T	T	S		T	T	S	G	G	G		S									B	T	T	T	B			G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	F	G	C	A	L	M	E	M	R	H	E	E	R	K	S	Y	K	V	R	F	N	S	V	S	G	P	L	A	N	V	R	F	S	V	F	G	L	G	S	R	A	Y	P	H	F	C	A	F	G	H	A	V	D	T	L	L	E	E	L	G	G	E	R	I	L	K	M	R	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T											T	S					T	T	T	T											T	T	S	S	S	T	T													T	T				S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	D	E	L	C	G	Q	E	E	A	F	R	T	W	A	K	K	V	F	K	A	A	C	D	V	F	C	V	G	D	D	V	N	I	E	S	N	D	R	S	W	K	R	N	K	F	R	L	T	Y	V	A	E	A	P	D	L	T	Q	G	L	S	N	V	H	K	K	R	V	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T	T																					T			S	S	S						S	S	S			T	T	T							S													T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	A	R	L	L	S	R	Q	N	L	Q	S	P	K	S	S	R	S	T	I	F	V	R	L	H	T	N	G	N	Q	E	L	Q	Y	Q	P	G	D	H	L	G	V	F	P	G	N	H	E	D	L	V	N	A	L	I	E	R	L	E	D	A	P	P	A	N	H	V	V	K	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S		T	T		S	S										T	T		G	G	G				T	T																			T	T		S	S				S		S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	E	M	L	E	E	R	N	T	A	L	G	V	I	S	N	W	K	D	E	S	R	L	P	P	C	T	I	F	Q	A	F	K	Y	Y	L	D	I	T	T	P	P	T	P	L	Q	L	Q	Q	F	A	S	L	A	T	N	E	K	E	K	Q	R	L	L	V	L	S	K	G	L	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S	S										S	S		S	B									T	B			S	S												T	T	B													T	T		S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	E	Y	E	E	W	K	W	G	K	N	P	T	M	V	E	V	L	E	E	F	P	S	I	Q	M	P	A	T	L	L	L	T	Q	L	S	L	L	Q	P	R	Y	Y	S	I	S	S	S	P	D	M	Y	P	D	E	V	H	L	T	V	A	I	V	S	Y	H	T	R	D	G	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				S	T	T	B											S		B								B		S		T	T	T	S	T	T													T	G	G	G	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	G	P	V	H	H	G	V	C	S	S	W	L	N	R	I	Q	A	D	D	V	V	P	C	F	V	R	G	A	P	S	F	H	L	P	R	N	P	Q	V	P	C	I	L	V	G	P	G	T	G	I	A	P	F	R	S	F	W	Q	Q	R	Q	F	D	I	Q	H	K	G	M	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S												T	T			T	T	S										G	G	G	S			S		T	T	S								G	G	G	G	T	T															S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	P	C	P	M	V	L	V	F	G	C	R	Q	S	K	I	D	H	I	Y	R	E	E	T	L	Q	A	K	N	K	G	V	F	R	E	L	Y	T	A	Y	S	R	E	P	D	R	P	K	K	Y	V	Q	D	V	L	Q	E	Q	L	A	E	S	V	Y	R	A	L	K	E	Q	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S		T	T	T	T		T	T										T	T	S									S	S		T	T	S												S	S										T	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	G	H	I	Y	V	C	G	D	V	T	M	A	A	D	V	L	K	A	I	Q	R	I	M	T	Q	Q	G	K	L	S	E	E	D	A	G	V	F	I	S	R	L	R	D	D	N	R	Y	H	E	D	I	F	G	V	T	L	R	T	Y	E	V	T	N	R	L	R	S	E	S	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																									T	T	T				T	T												T	T									S		S	S												T

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PDB structure

FASTA sequence

Hidden Markov model

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