Email l.a.kelley@imperial.ac.uk Description P75746 Date Thu Jan 5 12:13:43 GMT 2012 Unique Job ID 32ebaa6d1c8841af

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d2dfaa1 100.0 46 Fold:7-stranded beta/alpha barrel Superfamily:Glycoside hydrolase/deacetylase Family:LamB/YcsF-like 2 d1v6ta_ 100.0 43 Fold:7-stranded beta/alpha barrel Superfamily:Glycoside hydrolase/deacetylase Family:LamB/YcsF-like 3 c2x5eA_ 100.0 39 PDB header:unknown function Chain: A: PDB Molecule:upf0271 protein pa4511; PDBTitle: crystal structure of the hypothetical protein pa4511 from2 pseudomonas aeruginosa 4 d1xw8a_ 100.0 95 Fold:7-stranded beta/alpha barrel Superfamily:Glycoside hydrolase/deacetylase Family:LamB/YcsF-like 5 d2nlya1 91.1 16 Fold:7-stranded beta/alpha barrel Superfamily:Glycoside hydrolase/deacetylase Family:Divergent polysaccharide deacetylase 6 c2c1iA_ 89.5 18 PDB header:hydrolase Chain: A: PDB Molecule:peptidoglycan glcnac deacetylase; PDBTitle: structure of streptococcus pnemoniae peptidoglycan2 deacetylase (sppgda) d 275 n mutant. 7 d1ny1a_ 87.4 15 Fold:7-stranded beta/alpha barrel Superfamily:Glycoside hydrolase/deacetylase Family:NodB-like polysaccharide deacetylase 8 d1tz9a_ 84.1 16 Fold:TIM beta/alpha-barrel Superfamily:Xylose isomerase-like Family:UxuA-like 9 c1w17A_ 79.9 17 PDB header:hydrolase Chain: A: PDB Molecule:probable polysaccharide deacetylase pdaa; PDBTitle: structure of bacillus subtilis pdaa, a family 42 carbohydrate esterase. 10 c2qv5A_ 65.7 15 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein atu2773; PDBTitle: crystal structure of uncharacterized protein atu2773 from2 agrobacterium tumefaciens c58 11 d1ur4a_ 65.4 22 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:beta-glycanases 12 d2fvka2 62.4 28 Fold:TIM beta/alpha-barrel Superfamily:Metallo-dependent hydrolases Family:Hydantoinase (dihydropyrimidinase), catalytic domain 13 c1e9zA_ 58.9 25 PDB header:hydrolase Chain: A: PDB Molecule:urease subunit alpha; PDBTitle: crystal structure of helicobacter pylori urease 14 c1w8gA_ 58.5 12 PDB header:plp-binding protein Chain: A: PDB Molecule:hypothetical upf0001 protein yggs; PDBTitle: crystal structure of e. coli k-12 yggs 15 c1tvlA_ 58.1 21 PDB header:oxidoreductase Chain: A: PDB Molecule:protein ytnj; PDBTitle: structure of ytnj from bacillus subtilis 16 d1tvla_ 58.1 21 Fold:TIM beta/alpha-barrel Superfamily:Bacterial luciferase-like Family:Ssud-like monoxygenases 17 c3e0fA_ 57.3 18 PDB header:hydrolase Chain: A: PDB Molecule:putative metal-dependent phosphoesterase; PDBTitle: crystal structure of a putative metal-dependent phosphoesterase2 (bad_1165) from bifidobacterium adolescentis atcc 15703 at 2.40 a3 resolution 18 c3qxbB_ 56.5 15 PDB header:isomerase Chain: B: PDB Molecule:putative xylose isomerase; PDBTitle: crystal structure of a putative xylose isomerase (yp_426450.1) from2 rhodospirillum rubrum atcc 11170 at 1.90 a resolution 19 d1e9ya2 56.2 25 Fold:Urease, gamma-subunit Superfamily:Urease, gamma-subunit Family:Urease, gamma-subunit 20 d1ejxa_ 54.4 22 Fold:Urease, gamma-subunit Superfamily:Urease, gamma-subunit Family:Urease, gamma-subunit 21 d4ubpa_ not modelled 52.9 19 Fold:Urease, gamma-subunit Superfamily:Urease, gamma-subunit Family:Urease, gamma-subunit 22 c3tsuA_ not modelled 51.3 23 PDB header:transferase Chain: A: PDB Molecule:transcriptional regulatory protein; PDBTitle: crystal structure of e. coli hypf with amp-pnp and carbamoyl phosphate 23 c1y10C_ not modelled 50.0 11 PDB header:lyase Chain: C: PDB Molecule:hypothetical protein rv1264/mt1302; PDBTitle: mycobacterial adenylyl cyclase rv1264, holoenzyme, inhibited state 24 c2o7jA_ not modelled 47.5 13 PDB header:sugar binding protein Chain: A: PDB Molecule:oligopeptide abc transporter, periplasmic PDBTitle: the x-ray crystal structure of a thermophilic cellobiose2 binding protein bound with cellopentaose 25 c3noyA_ not modelled 45.8 25 PDB header:oxidoreductase Chain: A: PDB Molecule:4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; PDBTitle: crystal structure of ispg (gcpe) 26 d2nu7b1 not modelled 43.1 17 Fold:Flavodoxin-like Superfamily:Succinyl-CoA synthetase domains Family:Succinyl-CoA synthetase domains 27 c3bdkB_ not modelled 43.0 26 PDB header:lyase Chain: B: PDB Molecule:d-mannonate dehydratase; PDBTitle: crystal structure of streptococcus suis mannonate2 dehydratase complexed with substrate analogue 28 c2hk1D_ not modelled 42.5 13 PDB header:isomerase Chain: D: PDB Molecule:d-psicose 3-epimerase; PDBTitle: crystal structure of d-psicose 3-epimerase (dpease) in the presence of2 d-fructose 29 d1hara_ not modelled 42.0 7 Fold:DNA/RNA polymerases Superfamily:DNA/RNA polymerases Family:Reverse transcriptase 30 c2e67D_ not modelled 38.5 23 PDB header:structural genomics, unknown function Chain: D: PDB Molecule:hypothetical protein tthb029; PDBTitle: crystal structure of the hypothetical protein tthb029 from thermus2 thermophilus hb8 31 c3epmB_ not modelled 38.0 20 PDB header:biosynthetic protein Chain: B: PDB Molecule:thiamine biosynthesis protein thic; PDBTitle: crystal structure of caulobacter crescentus thic 32 c2ou4C_ not modelled 37.3 15 PDB header:isomerase Chain: C: PDB Molecule:d-tagatose 3-epimerase; PDBTitle: crystal structure of d-tagatose 3-epimerase from2 pseudomonas cichorii 33 d1xima_ not modelled 36.8 28 Fold:TIM beta/alpha-barrel Superfamily:Xylose isomerase-like Family:Xylose isomerase 34 c2pfsA_ not modelled 35.6 13 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:universal stress protein; PDBTitle: crystal structure of universal stress protein from nitrosomonas2 europaea 35 d1nq6a_ not modelled 34.9 13 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:beta-glycanases 36 c3hgmD_ not modelled 33.7 14 PDB header:signaling protein Chain: D: PDB Molecule:universal stress protein tead; PDBTitle: universal stress protein tead from the trap transporter2 teaabc of halomonas elongata 37 d1qt1a_ not modelled 33.3 23 Fold:TIM beta/alpha-barrel Superfamily:Xylose isomerase-like Family:Xylose isomerase 38 d1qyia_ not modelled 31.7 12 Fold:HAD-like Superfamily:HAD-like Family:Hypothetical protein MW1667 (SA1546) 39 d1eucb1 not modelled 31.7 18 Fold:Flavodoxin-like Superfamily:Succinyl-CoA synthetase domains Family:Succinyl-CoA synthetase domains 40 c3qgaD_ not modelled 31.0 23 PDB header:hydrolase Chain: D: PDB Molecule:fusion of urease beta and gamma subunits; PDBTitle: 3.0 a model of iron containing urease urea2b2 from helicobacter2 mustelae 41 c3mvnA_ not modelled 29.1 13 PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramate:l-alanyl-gamma-d-glutamayl-medo- PDBTitle: crystal structure of a domain from a putative udp-n-acetylmuramate:l-2 alanyl-gamma-d-glutamayl-medo-diaminopimelate ligase from haemophilus3 ducreyi 35000hp 42 d1v6wa2 not modelled 28.2 19 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:beta-glycanases 43 d1xlma_ not modelled 27.6 19 Fold:TIM beta/alpha-barrel Superfamily:Xylose isomerase-like Family:Xylose isomerase 44 d1ulza2 not modelled 26.2 25 Fold:PreATP-grasp domain Superfamily:PreATP-grasp domain Family:BC N-terminal domain-like 45 d2j9ga2 not modelled 25.7 25 Fold:PreATP-grasp domain Superfamily:PreATP-grasp domain Family:BC N-terminal domain-like 46 c3c6cA_ not modelled 25.4 14 PDB header:hydrolase Chain: A: PDB Molecule:3-keto-5-aminohexanoate cleavage enzyme; PDBTitle: crystal structure of a putative 3-keto-5-aminohexanoate cleavage2 enzyme (reut_c6226) from ralstonia eutropha jmp134 at 1.72 a3 resolution 47 c3louB_ not modelled 24.8 23 PDB header:hydrolase Chain: B: PDB Molecule:formyltetrahydrofolate deformylase; PDBTitle: crystal structure of formyltetrahydrofolate deformylase (yp_105254.1)2 from burkholderia mallei atcc 23344 at 1.90 a resolution 48 d2c1ia1 not modelled 24.7 16 Fold:7-stranded beta/alpha barrel Superfamily:Glycoside hydrolase/deacetylase Family:NodB-like polysaccharide deacetylase 49 c1k97A_ not modelled 24.6 16 PDB header:ligase Chain: A: PDB Molecule:argininosuccinate synthase; PDBTitle: crystal structure of e. coli argininosuccinate synthetase in complex2 with aspartate and citrulline 50 c3bzjA_ not modelled 24.5 16 PDB header:hydrolase Chain: A: PDB Molecule:uv endonuclease; PDBTitle: uvde k229l 51 d1ur1a_ not modelled 24.0 15 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:beta-glycanases 52 d2glka1 not modelled 23.6 24 Fold:TIM beta/alpha-barrel Superfamily:Xylose isomerase-like Family:Xylose isomerase 53 c3sg0A_ not modelled 23.5 12 PDB header:signaling protein Chain: A: PDB Molecule:extracellular ligand-binding receptor; PDBTitle: the crystal structure of an extracellular ligand-binding receptor from2 rhodopseudomonas palustris haa2 54 c3mr7B_ not modelled 23.1 17 PDB header:hydrolase Chain: B: PDB Molecule:adenylate/guanylate cyclase/hydrolase, alpha/beta fold PDBTitle: crystal structure of adenylate/guanylate cyclase/hydrolase from2 silicibacter pomeroyi 55 d1zvpa2 not modelled 22.1 27 Fold:Ferredoxin-like Superfamily:ACT-like Family:VC0802-like 56 c3chvA_ not modelled 21.7 23 PDB header:metal binding protein Chain: A: PDB Molecule:prokaryotic domain of unknown function (duf849) with a tim PDBTitle: crystal structure of a prokaryotic domain of unknown function (duf849)2 member (spoa0042) from silicibacter pomeroyi dss-3 at 1.45 a3 resolution 57 c3ugsB_ not modelled 21.4 11 PDB header:transferase Chain: B: PDB Molecule:undecaprenyl pyrophosphate synthase; PDBTitle: crystal structure of a probable undecaprenyl diphosphate synthase2 (upps) from campylobacter jejuni 58 c3n2aA_ not modelled 21.4 17 PDB header:ligase Chain: A: PDB Molecule:bifunctional folylpolyglutamate synthase/dihydrofolate PDBTitle: crystal structure of bifunctional folylpolyglutamate2 synthase/dihydrofolate synthase from yersinia pestis co92 59 c2dclB_ not modelled 21.1 23 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical upf0166 protein ph1503; PDBTitle: structure of ph1503 protein from pyrococcus horikoshii ot3 60 d1uasa2 not modelled 21.0 8 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:Amylase, catalytic domain 61 d1hl9a2 not modelled 20.8 10 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:Putative alpha-L-fucosidase, catalytic domain 62 c3tpaA_ not modelled 20.4 9 PDB header:heme binding protein Chain: A: PDB Molecule:heme-binding protein a; PDBTitle: structure of hbpa2 from haemophilus parasuis 63 c3o1lB_ not modelled 20.1 14 PDB header:hydrolase Chain: B: PDB Molecule:formyltetrahydrofolate deformylase; PDBTitle: crystal structure of a formyltetrahydrofolate deformylase (pspto_4314)2 from pseudomonas syringae pv. tomato str. dc3000 at 2.20 a resolution 64 d1abra_ not modelled 20.1 15 Fold:Ribosome inactivating proteins (RIP) Superfamily:Ribosome inactivating proteins (RIP) Family:Plant cytotoxins 65 c1ygyA_ not modelled 20.1 21 PDB header:oxidoreductase Chain: A: PDB Molecule:d-3-phosphoglycerate dehydrogenase; PDBTitle: crystal structure of d-3-phosphoglycerate dehydrogenase from2 mycobacterium tuberculosis 66 c2i7xA_ not modelled 19.9 21 PDB header:rna binding protein, protein binding Chain: A: PDB Molecule:protein cft2; PDBTitle: structure of yeast cpsf-100 (ydh1p) 67 d2i7xa1 not modelled 19.9 21 Fold:Metallo-hydrolase/oxidoreductase Superfamily:Metallo-hydrolase/oxidoreductase Family:beta-CASP RNA-metabolising hydrolases 68 d1st6a4 not modelled 19.8 25 Fold:Four-helical up-and-down bundle Superfamily:alpha-catenin/vinculin-like Family:alpha-catenin/vinculin 69 c3cpgA_ not modelled 19.8 12 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of an unknown protein from bifidobacterium2 adolescentis 70 d2gc6a1 not modelled 19.7 17 Fold:MurD-like peptide ligases, peptide-binding domain Superfamily:MurD-like peptide ligases, peptide-binding domain Family:Folylpolyglutamate synthetase, C-terminal domain 71 c3fh0A_ not modelled 19.3 15 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative universal stress protein kpn_01444; PDBTitle: crystal structure of putative universal stress protein kpn_01444 -2 atpase 72 c3t0nA_ not modelled 19.2 10 PDB header:signaling protein Chain: A: PDB Molecule:twin-arginine translocation pathway signal; PDBTitle: crystal structure of twin-arginine translocation pathway signal from2 rhodopseudomonas palustris bisb5 73 c2fvhB_ not modelled 18.9 29 PDB header:hydrolase Chain: B: PDB Molecule:urease gamma subunit; PDBTitle: crystal structure of rv1848, a urease gamma subunit urea (urea2 amidohydrolase), from mycobacterium tuberculosis 74 d1pb5a_ not modelled 18.6 60 Fold:Notch domain Superfamily:Notch domain Family:Notch domain 75 c1w96B_ not modelled 18.6 11 PDB header:ligase Chain: B: PDB Molecule:acetyl-coenzyme a carboxylase; PDBTitle: crystal structure of biotin carboxylase domain of acetyl-2 coenzyme a carboxylase from saccharomyces cerevisiae in3 complex with soraphen a 76 c2xzmO_ not modelled 18.4 15 PDB header:ribosome Chain: O: PDB Molecule:rps13e; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 1 77 d1bxca_ not modelled 18.3 28 Fold:TIM beta/alpha-barrel Superfamily:Xylose isomerase-like Family:Xylose isomerase 78 c3la4A_ not modelled 18.2 31 PDB header:hydrolase Chain: A: PDB Molecule:urease; PDBTitle: crystal structure of the first plant urease from jack bean (canavalia2 ensiformis) 79 d1i60a_ not modelled 18.0 17 Fold:TIM beta/alpha-barrel Superfamily:Xylose isomerase-like Family:IolI-like 80 c3sdoB_ not modelled 17.9 16 PDB header:oxidoreductase Chain: B: PDB Molecule:nitrilotriacetate monooxygenase; PDBTitle: structure of a nitrilotriacetate monooxygenase from burkholderia2 pseudomallei 81 d1st6a3 not modelled 17.8 15 Fold:Four-helical up-and-down bundle Superfamily:alpha-catenin/vinculin-like Family:alpha-catenin/vinculin 82 c3dddA_ not modelled 17.7 11 PDB header:transferase Chain: A: PDB Molecule:putative acetyltransferase; PDBTitle: crystal structure of a putative acetyltransferase (np_142035.1) from2 pyrococcus horikoshii at 2.25 a resolution 83 c1kh2D_ not modelled 17.5 24 PDB header:ligase Chain: D: PDB Molecule:argininosuccinate synthetase; PDBTitle: crystal structure of thermus thermophilus hb82 argininosuccinate synthetase in complex with atp 84 c3civA_ not modelled 17.5 15 PDB header:hydrolase Chain: A: PDB Molecule:endo-beta-1,4-mannanase; PDBTitle: crystal structure of the endo-beta-1,4-mannanase from2 alicyclobacillus acidocaldarius 85 c3ue9A_ not modelled 17.4 18 PDB header:ligase Chain: A: PDB Molecule:adenylosuccinate synthetase; PDBTitle: crystal structure of adenylosuccinate synthetase (ampsase) (pura) from2 burkholderia thailandensis 86 d1nfpa_ not modelled 17.0 19 Fold:TIM beta/alpha-barrel Superfamily:Bacterial luciferase-like Family:Non-fluorescent flavoprotein (luxF, FP390) 87 d2fdra1 not modelled 16.9 13 Fold:HAD-like Superfamily:HAD-like Family:beta-Phosphoglucomutase-like 88 d1o94c_ not modelled 16.5 15 Fold:Adenine nucleotide alpha hydrolase-like Superfamily:Adenine nucleotide alpha hydrolases-like Family:ETFP subunits 89 d1efpb_ not modelled 16.4 16 Fold:Adenine nucleotide alpha hydrolase-like Superfamily:Adenine nucleotide alpha hydrolases-like Family:ETFP subunits 90 c3t66A_ not modelled 16.1 27 PDB header:transport protein Chain: A: PDB Molecule:nickel abc transporter (nickel-binding protein); PDBTitle: crystal structure of nickel abc transporter from bacillus halodurans 91 c3ly1C_ not modelled 16.0 19 PDB header:transferase Chain: C: PDB Molecule:putative histidinol-phosphate aminotransferase; PDBTitle: crystal structure of putative histidinol-phosphate aminotransferase2 (yp_050345.1) from erwinia carotovora atroseptica scri1043 at 1.80 a3 resolution 92 d2c71a1 not modelled 15.9 21 Fold:7-stranded beta/alpha barrel Superfamily:Glycoside hydrolase/deacetylase Family:NodB-like polysaccharide deacetylase 93 d1gvia2 not modelled 15.5 30 Fold:Glycosyl hydrolase domain Superfamily:Glycosyl hydrolase domain Family:alpha-Amylases, C-terminal beta-sheet domain 94 d1ztwa1 not modelled 15.4 11 Fold:DNA/RNA polymerases Superfamily:DNA/RNA polymerases Family:Reverse transcriptase 95 d2pw6a1 not modelled 15.4 20 Fold:Phosphorylase/hydrolase-like Superfamily:LigB-like Family:LigB-like 96 c3elyA_ not modelled 15.2 18 PDB header:transferase Chain: A: PDB Molecule:methyltransferase; PDBTitle: wesselsbron virus methyltransferase in complex with adohcy 97 d8ruca2 not modelled 15.1 24 Fold:Ferredoxin-like Superfamily:RuBisCO, large subunit, small (N-terminal) domain Family:Ribulose 1,5-bisphosphate carboxylase-oxygenase 98 c2c2xB_ not modelled 14.8 20 PDB header:oxidoreductase Chain: B: PDB Molecule:methylenetetrahydrofolate dehydrogenase- PDBTitle: three dimensional structure of bifunctional2 methylenetetrahydrofolate dehydrogenase-cyclohydrolase3 from mycobacterium tuberculosis 99 c2grvC_ not modelled 14.7 14 PDB header:biosynthetic protein Chain: C: PDB Molecule:lpqw; PDBTitle: crystal structure of lpqw